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E-GEOD-14339 GSE14339 transcription profiling by array Mus musculus

Stress-dependent CHIP/Daxx interaction suppresses the p53 apoptotic program

提交 2009年1月8日 ·发布 2010年4月3日 ·更新 2014年5月1日
48
样本数
24
实验数
1
芯片平台
1
相关文献
实验描述

Our previous studies have implicated CHIP as a co-chaperone/ubiquitin ligase, whose activities yield protection against stress-induced apoptotic events. In this report, we demonstrate a stress-dependent interaction between CHIP (carboxyl terminus of Hsp70-interacting protein) and Daxx, death domain-associated protein. This interaction interferes with the stress-dependent association of HIPK2 with Daxx, blocking phosphorylation of serine 46 in p53 and inhibiting the p53-dependent apoptotic program. Microarray analysis confirmed suppression of the p53-dependent transcriptional portrait in CHIP (+/+) but not in CHIP (-/-) heat shocked MEFs. The interaction between CHIP and Daxx results in ubiquitination of Daxx which is then partitioned to an insoluble compartment of the cell. In vitro ubiquitination of Daxx by CHIP revealed that Ub chain formation utilizes non canonical lysine linkages associated with resistance to proteasomal degradation. CHIP's ubiquitination of Daxx utilizes lysines 630 and 631 and competes with the cell's sumoylation machinery at these residues. These studies implicate CHIP as a stress-dependent regulator of Daxx that counters Daxx's pro-apoptotic influence in the cell. By abrogating p53-dependent apoptotic pathways and by ubiquitination competitive with Daxx sumoylation, CHIP integrates the cell's proteotoxic stress response with cell cycle pathways that influence cell survival. Keywords: p53, apoptosis, cell stress, ubiquitination We utilized a “sample x reference” experimental design strategy in which RNA extracted from mouse embryonic fibroblasts was hybridized to the microarray slide in the presence of labeled Universal Mouse Reference RNA (UMRR, Stratagene, LaJolla, CA). A total of 24 RNA samples were used in this analysis. Briefly, five hundred nanograms of total RNA were used for gene expression profiling following reverse transcription and T-7 polymerase-mediated amplification/labeling with Cyanine-5 CTP. Labeled subject cRNA was co-hybridized to Agilent G4112F Whole Mouse Genome 4x44K oligonucleotide arrays with equimolar amounts of Cyanine-3 labeled UHRR. Slides were hybridized, washed, and scanned on an Axon 4000b microarray scanner. The data were processed using Feature Extaction software (Agilent, Santa Clara, CA).

参考文献
Stress-dependent Daxx-CHIP interaction suppresses the p53 apoptotic program.
McDonough H, Charles PC, Hilliard EG, Qian SB, Min JN, Portbury A, Cyr DM, Patterson C
PMID: 19465479
芯片平台
A-MEXP-724
Agilent Whole Mouse Genome Microarray 4x44K 014868 G4122F (annotation from 02.2007)(24 例)
样本属性
Organism
Mus musculus
实验信息
登记号
E-GEOD-14339
GEO 编号
GSE14339
实验类型
transcription profiling by array
物种
Mus musculus
提交日期
2009年1月8日
发布日期
2010年4月3日
更新日期
2014年5月1日
提交者
Douglas M Cyr、 Jin-Na Min、 Andrea Portbury、 Cam Patterson、 Holly McDonough、 Eleanor G Hilliard、 Shu-bing Qian、 Peter C Charles、 Jonathan C Schisler
分析服务
分析服务

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