主页 实验库实验详情
E-GEOD-19272 GSE19272 transcription profiling by array Mus musculus

Genome-wide comparison between IL-17 and combined TNF-alpha/ IL-17 induced genes in primary murine hepatocytes

·发布 2010年3月7日 ·更新 2015年9月10日
30
样本数
30
实验数
1
芯片平台
实验描述

Cytokines such as TNF-alpha and IL-1beta are known for their contribution to inflammatory processes in liver . In contrast, the cytokine IL-17 has not yet been assigned a role in liver diseases. IL-17 can cooperate with TNF-alpha to induce a synergistic response on several target genes in different cell lines, but no data exist for primary hepatocytes. To enhance our knowledge on the impact of IL-17 alone and combined with TNF-alpha in primary murine hepatocytes a comprehensive microarray study was designed. IL-1beta was included as this cytokine is suggested to act in a similar manner as the combination of TNF-alpha and IL-17, especially with respect to its role in mRNA stabilization. Results: The present microarray analysis demonstrates that primary murine hepatocytes responded to IL-17 stimulation by upregulation of chemokines and genes, which are functionally responsible to increase and sustain inflammation. Cxcl2, Nfkbiz and Zc3h12a were strongly induced, whereas the majority of the genes were only very moderately upregulated. Promoter analysis revealed involvement of NF-kappaB in the activation of many genes. Combined stimulation of TNF-alpha/IL-17 resulted in enhanced induction of gene expression, but significantly synergistic effects could be applied only to a few genes, such as Nfkbiz, Cxcl2, Zc3h12 and Steap4. Comparison of the gene expression profile obtained after stimulation of TNF-alpha/IL-17 versus IL-1 proposed a IL-1beta-like effect of the latter cytokine combination. Moreover, evidence was provided that modulation of mRNA stability may be a major mechanism by which IL-17 regulates gene expression in primary hepatocytes. This assumption was exemplarily proven for Nfkbiz mRNA for the first time in hepatocytes. Our studies also suggest that RNA stability can partially be correlated to the existence of AU rich elements, but further mechanisms like the RNase-activity of the upregulated Zc3h12a have to be considered. Conclusions: Our microarray analysis gives new insights in IL-17 induced gene expression in primary hepatocytes highlighting the crosstalk with the NF-kappaB signalling pathway. Gene expression profile suggests IL-17 a role in sustaining liver inflammatory processes most likely by RNA stabilization. Altogether, our results provide evidence that IL-17 alone and in concert with TNF-alpha may play a role in inflammatory liver diseases. Primary murine hepatocytes of three animals stimulated for 1 or 4h by TNF-alpha, IL-1beta, IL-17 or TNF-alpha followed by IL-17 were used for microarray analysis.

芯片平台
A-AFFY-45
Affymetrix GeneChip Mouse Genome 430 2.0 [Mouse430_2](30 例)
样本属性
cell type
hepatocytes
organism
Mus musculus
organism part
liver
sex
male
stimulus
control, interleukin-1 beta (Mus musculus), interleukin-17 (Mus musculus), tumor necrosis factor-alpha, tumor necrosis factor-alpha/interleukin-17 (Mus musculus)
time
1 hour, 4 hour
实验信息
登记号
E-GEOD-19272
GEO 编号
GSE19272
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2010年3月7日
更新日期
2015年9月10日
提交者
Sabine MacNelly、 Irmgard Merfort、 Fritz von Weizsacker、 Johannes Bode、 Ute Albrecht、 Norbert Gretz、 Julia Retey、 Titus Sparna、 Hans-Peter Fischer、 Kathrin Schmich、 Katrin Naumann、 Jens Timmer
分析服务
分析服务

联系地址

山东省济南市章丘区文博路2号

齐鲁师范学院 genelibs生信实验室

山东省济南市高新区舜华路750号

大学科技园北区F座4单元2楼

电话: 0531-88819269

微信公众号

关注微信订阅号,实时查看信息,关注医学生物学动态。


商务邮箱

E-mail: [email protected]