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E-GEOD-19406 GSE19406 transcription profiling by array Homo sapiens

Transcriptome drift of FADU after expression of HIF-1a, Twist1 or Bmi1

·Released Dec. 10, 2010 ·Updated June 10, 2011
4
Samples
4
Assays
1
Array Platforms
Description

Expression of HIF-1a or Twist1 or Bmi1 in human hypopharyngeal cancer cell line FADU results in the drift of transcriptome profile from an epithelial cell-like signature to a mesenchymal stem cell-like signature. Stable transfection of pHA-HIF1a(dODD), pFLAG-Twist1 or pcDNA3-Bmi1 in FADU cell and analyzed the transcriptome by cDNA microarray. FADU transfected with pcDNA3.1 empty vector was used as a control of experiment.

Array Platforms
A-AFFY-44
Affymetrix GeneChip Human Genome U133 Plus 2.0 [HG-U133_Plus_2](4 items)
Sample Attributes
cell line
FaDu
cell line source age
56
cell line source ethnicity
Caucasian
cell line source gender
male
cell line source tissue
primary human hypopharyngeal squamous cell carcinoma, primary human hypopharyngeal squamous cell carcinoma p
Organism
Homo sapiens
transfection
cDNA3-Bmi1, pcDNA3.1 empty vector, pFLAG-Twist1, pHA-HIF1a(dODD)
Experiment Info
Accession
E-GEOD-19406
GEO ID
GSE19406
Type
transcription profiling by array
Organism
Homo sapiens
Released
Dec. 10, 2010
Updated
June 10, 2011
Submitter
Hsei-Wei Wang、 Wei-Lun Huang、 Muh-Hwa Yang、 Muh-Hwa Yang
Analysis Services
Analysis Services

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