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E-GEOD-20114 GSE20114 transcription profiling by array Homo sapiens

Transcription profiling by array of human peripheral blood mononuclear cells from patients with hypertriglyceridemia after treatment with docosahexaenoic acid and/or lipopolysaccharide

·发布 2010年2月21日 ·更新 2015年9月2日
15
样本数
15
实验数
1
芯片平台
1
相关文献
实验描述

Previously published results from our double-blind, placebo-controlled parallel study with docosahexaenoic acid (DHA) supplementation (3 g/d, 90 d) to hypertriglyceridemic men (39-66yr) showed that DHA reduced several risk factors for cardiovascular disease (CVD), including the plasma concentration of inflammatory markers. To determine the effect of DHA supplementation on the global gene expression pattern, we performed Affymetrix GeneChip microarray analysis of blood cells (treated with lipopolysaccharide (LPS) or vehicle) drawn before and after the supplementation from the hyperlipidemic men who participated in the previous study. Genes that were significantly differentially regulated by the LPS treatment and DHA supplementation were identified. Differential regulation of 18 genes was then confirmed by quantitative RT-PCR. Both microarray and qRT-PCR data showed that the expression of LDL receptor (LDLR), oxidized LDL receptor (OLR1), and cathepsin L1 (CTSL) was significantly suppressed by DHA supplementation; however, LPS stimulated the expression of LDLR and CTSL but not that of OLR1. LPS up-regulated and DHA suppressed the expression of prostaglandin E synthase (PTGES), PPAR delta, and various chemokines. Enrichment with Gene Ontology categories demonstrated that the genes related to transcription factor activity, immune responses, host defense responses, inflammatory responses, and apoptosis were inversely regulated by LPS and DHA. These results provide supporting evidence for the anti-inflammatory effects of DHA supplementation, and reveal previously unrecognized genes that are regulated by DHA, and are associated with risk factors of cardiovascular diseases. Double-blind, placebo-controlled parallel study with DHA supplementation to hypertriglyceridemic men. Gene expression detected in LPS-stimulated (LPS) and unstimulated (vehicle) white blood cells. 3-4 replicates per group.

参考文献
Modulation of blood cell gene expression by DHA supplementation in hypertriglyceridemic men
Dawson K, Zhao L, Adkins Y, Vemuri M, Rodriguez RL, Gregg JP, Kelley DS, Hwang DH.
PMID: 21775114
芯片平台
A-AFFY-44
Affymetrix GeneChip Human Genome U133 Plus 2.0 [HG-U133_Plus_2](15 例)
样本属性
cell type
mononuclear cell
clinical history
docosahexaenoic acid, vehicle
disease
hypertriglyceridemia
organism
Homo sapiens
organism part
peripheral blood
sex
male
stimulus
lipopolysaccharide, vehicle
实验信息
登记号
E-GEOD-20114
GEO 编号
GSE20114
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
2010年2月21日
更新日期
2015年9月2日
提交者
Madhuri Vemuri、 Raymond L Rodriguez、 Yuriko Adkins、 Kevin Dawson、 Daniel H Hwang、 Darshan S Kelley、 Ling Zhao
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