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E-GEOD-20613 GSE20613 transcription profiling by array Homo sapiens

The Sp100 component of ND10/PML bodies is a potent tumor suppressor

·发布 2012年12月4日 ·更新 2014年6月2日
12
样本数
12
实验数
1
芯片平台
1
相关文献
实验描述

The Sp100 component of ND10/PML bodies is a potent tumor suppressor: accelerated senescence and rapid malignant transformation of human fibroblasts through modulation of an embryonic stem cell program. Identifying the functions of proteins, which define specific subnuclear structures and territories, is important for understanding eukaryotic nuclear dynamics. Sp100 is a prototypical protein of ND10/PML bodies and colocalizes with the proto-oncogenic protein PML and Daxx, proteins with critical roles in oncogenic transformation, interferon-mediated viral resistance and response to PML-directed cancer therapeutics. Sp100 isoforms contain PHD, Bromo and HMG domains and are highly sumoylated at ND10/PML bodies, all characteristics suggestive of a role in chromatin mediated gene regulation. However, a clear role for Sp100 in oncogenesis has not been defined. Using isoform-specific knockdown techniques, we show that most human diploid fibroblasts, which lack Sp100, rapidly senesce. microarray analysis of mRNAs expression in BJV (collected at passage 47) and BJ-S (collected at passage 35). In addition, samples were treated for 24 h with 1000 U/ml IFNB. All RNAs were collected in triplicates of biological samples.

参考文献
Sp100 as a potent tumor suppressor: accelerated senescence and rapid malignant transformation of human fibroblasts through modulation of an embryonic stem cell program.
Negorev DG, Vladimirova OV, Kossenkov AV, Nikonova EV, Demarest RM, Capobianco AJ, Showe MK, Rauscher FJ 3rd, Showe LC, Maul GG
PMID: 21118961
芯片平台
A-MEXP-930
Illumina Human-6 v2 Expression BeadChip(12 例)
样本属性
cell line
BJ cells
cell passage
35, 47
Organism
Homo sapiens
treatment group
treated with IFNb
variation
Sp100 knock out, transduced with empty vector
实验信息
登记号
E-GEOD-20613
GEO 编号
GSE20613
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
2012年12月4日
更新日期
2014年6月2日
提交者
Louise C Showe、 Louise C Showe、 Andrew V Kossenkov、 Anthony J Capobianco、 Elena V Nikonova、 Frank J Rauscher III、 Renee M Demarest、 Dmitri G Negorev、 Olga V Vladimirova
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分析服务

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