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E-GEOD-21119 GSE21119 transcription profiling by array Ustilago maydis

Effect of clp1 induction on b-dependent gene regulation

·Released March 30, 2011 ·Updated April 14, 2011
8
Samples
8
Assays
1
Array Platforms
Description

The clp1 gene is a b-regulated gene that is required for clamp formation during the biotrophic growth phase of U. maydis. Clp1 expression blocks b-dependent filament formation and cell cycle arrest if co-induced with the b-heterodimer. Strains AB33 (control) and UMS84 were grown for the times indicated in array medium containing 3 g/l nitrate and 1% arabinose for the induction of nar1P- (bE1/bW2) and crg1P- (clp1) controlled gene expression. Samples were taken from two biological replicates each.

Array Platforms
A-GEOD-3681
MPI UstilagoA(8 items)
Sample Attributes
BioSourceProvider
Mario Scherer, Joerg Kaemper
Organism
Ustilago maydis
strain
AB33 is a FB2 (a2 b2) derivative in which the induction of the bE1 and bW2 genes is under the control of the nitrate-inducible nar1 promoter., UMS84 is a FB2 (a2 b2) derivative in which the induction of the bE1 and bW2 genes is under the control of the nitrate-inducible nar1 promoter and the expression of the clp1 gene is under the control of the arabinose-inducible crg1 promoter.
time
12h array medium/nitrate/arabinose, 5h array medium/nitrate/arabinose
Experiment Info
Accession
E-GEOD-21119
GEO ID
GSE21119
Type
transcription profiling by array
Organism
Ustilago maydis
Released
March 30, 2011
Updated
April 14, 2011
Submitter
Mario Scherer、 Jörg Thomas Kämper、 Kai Heimel、 Joerg Kaemper
Analysis Services
Analysis Services

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