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E-GEOD-21542 GSE21542 transcription profiling by array Mus musculus

The Effects of Aging on the Molecular and Cellular Composition of the Prostate Microenvironment

·发布 2010年9月15日 ·更新 2014年5月1日
64
样本数
32
实验数
2
芯片平台
1
相关文献
实验描述

Advancing age is associated with substantial increases in the incidence rates of common diseases affecting the prostate including benign prostatic hyperplasia (BPH) and prostate carcinoma. However, to date, there is no established molecular explanation for the age-dependent increases in these pathologies. The prostate is comprised of a functional secretory epithelium supported by a spectrum of cell types and structural elements comprising the stroma. As reciprocal interactions between epithelium and stromal constituents are essential for normal organogenesis and serve to maintain normal functions, discordance within the stromal could permit or promote disease processes. In this study we sought to identify aging-associated alterations in the mouse prostate that could influence pathology. We quantitated transcript levels in microdissected periglandular stroma from young (4 month-old) and old (20-24 month-old) C57BL/6 mice, and identified a significant change in the expression of 1259 genes (p<0.05). These included increases in transcripts encoding genes associated with inflammation (e.g., Ccl8, Ccl12), genotoxic/ oxidative stress (e.g., Apod, Serpinb5) and paracrine-acting proteins (e.g., Cyr61). The expression of several collagen genes (e.g., Col1a1 and Col3a1) exhibited age associated declines. By immunofluorescence and electron microscopy we determined that the aged prostate contains an abundant disorganized collagen matrix and a significant increase in inflammatory infiltrates comprised of macrophages, T cells and, to a lesser extent, B cells. These findings demonstrated that during normal aging the prostate stroma exhibits phenotypic and molecular characteristics plausibly contributing to the striking age associated pathologies affecting the prostate through oxidative stress and inflammatory cell damage. Custom Agilent 44K whole mouse genome expression oligonucleotide microarrays as well as custom mouse cDNA microarrays were used to measure transcript levels in microdissected periglandular stroma from young (4 month-old) and old (20-24 month-old) C57BL/6 mice. All samples were laser-capture microdissected and total RNA isolated and amplified prior to hybridization against a reference pool of normal adult mouse tissues.

参考文献
The effects of aging on the molecular and cellular composition of the prostate microenvironment.
Bianchi-Frias D, Vakar-Lopez F, Coleman IM, Plymate SR, Reed MJ, Nelson PS
PMID: 20824135
芯片平台
A-GEOD-4070
Mouse Prostate MPEDB cDNA Array v2(24 例)
A-GEOD-10361
Agilent-016579 Nelson Whole Mouse Genome Microarray 4x44K(8 例)
样本属性
age
20-24 month-old, 4 month-old, adult
amplification
one round aRNA, two round aRNA
gender
male
Organism
Mus musculus
strain
C57BL/6, Swiss-Webster
tissue
pool of anterior lobe prostate epithelium laser capture microdissected from three mice, pool of anterior lobe prostate stroma laser capture microdissected from three mice, pool of dorsal lobe prostate epithelium laser capture microdissected from three mice, pool of dorsal lobe prostate stroma laser capture microdissected from three mice, reference pool of normal adult tissues (10% prostate and 30% each testis, liver, and kidney)
实验信息
登记号
E-GEOD-21542
GEO 编号
GSE21542
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2010年9月15日
更新日期
2014年5月1日
提交者
Ilsa Coleman、 Ilsa M Coleman、 Peter S Nelson、 May Reed、 Daniella Bianchi-Frias、 Funda Vakar-Lopez、 Stephen R Plymate
分析服务
分析服务

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