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E-GEOD-22645 GSE22645 transcription profiling by array Mus musculus

Mechanism of action of RPS19R62W mutation in Diamond-Blackfan Anemia (DBA)

·发布 2011年6月29日 ·更新 2011年7月11日
6
样本数
6
实验数
1
芯片平台
实验描述

RPS19 mutations are the most common cause of the human disorder Diamond Blackfan Anemia. The R62W mutation was hypothesized to act in a dominant negative fashion and mice expressing RPS19R62W have many of the characteristics of Diamond Blackfan Anemia. Diamond-Blackfan Anemia (DBA), is an inherited erythroblastopenia associated with mutations in at least 8 different ribosomal protein genes. Mutations in the gene encoding Ribosomal Protein S19 (RPS19) have been identified in ~25% of DBA families. Most of these mutations disrupt either the translation or stability of the RPS19 protein and are predicted to cause DBA by haploinsufficiency. However, approximately ~30% of RPS19 mutations are missense mutations that do not alter the stability of the RPS19 protein and are hypothesized to act by a dominant negative mechanism. To formally test this hypothesis, we generated a transgenic mouse model expressing an RPS19 mutation in which an Arginine residue is replaced with a Tryptophan residue at codon 62 (RPS19R62W). Constitutive expression of RPS19R62W in developing mice was lethal. Conditional expression of RPS19R62W resulted in growth retardation, a mild anemia with reduced numbers of erythroid progenitors and significant inhibition of terminal erythroid maturation, similar to DBA. RNA profiling demonstrated over 700 dysregulated genes belonging to the same pathways that are disrupted in RNA profiles of DBA patient cells. The samples compared are RNA extracted from CD71 positive erythroblasts sorted from the bone marrow of wild type mice and mice expressing a mutant RPS19 (RPS19R62W) transgene

芯片平台
A-AFFY-36
Affymetrix GeneChip Mouse Genome 430A 2.0 [Mouse430A_2](6 例)
样本属性
cell type
CD71 positive erythroblasts
genotype/variation
mutant RPS19, wild type
Organism
Mus musculus
strain
FVB/N
tissue
bone marrow
实验信息
登记号
E-GEOD-22645
GEO 编号
GSE22645
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2011年6月29日
更新日期
2011年7月11日
提交者
Emily Devlin、 Christopher Pan、 David Bodine
分析服务
分析服务

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