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E-GEOD-22782 GSE22782 transcription profiling by array Sus scrofa

Pulmonary alveolar macrophages (PAMs) of Tongcheng piglets response to HP-PRRSV infection in vivo

·Released June 30, 2012 ·Updated July 18, 2012
6
Samples
6
Assays
1
Array Platforms
1
References
Description

Porcine reproductive and respiratory syndrome (PRRS), caused by PRRS virus (PRRSV), is the most economically important disease in pig populations. Lung damage is one major pathological condition following PRRSV infection, often leading to animal death. In vivo, PRRSV productive infection occurs predominately in alveolar macrophages of the lung. Here, transcriptome profiling of pulmonary alveolar macrophages (PAMs) from Tongcheng piglets pre- and post- infection of highly pathogenic PRRSV has been performed using porcine Affymetrix GeneChip. All animal procedures were performed according to protocols approved by the Biological Studies Animal Care and Use Committee of Hubei Province, China. Piglets used in this study were free from PRRSV, pseudorabies virus (PRV) and porcine circovirus type 2 (PCV2) determined by ELISA test for serum antibodies. Twelve of 5-week-old boars were obtained from three litters (four piglets per litter), and raised in pathogen-free facilities. In order to perform a paired experiment, every four full-sib individuals were divided equally into two groups: one infected group and one control group with 6 piglets in each group. The infected groups were challenged with PRRSV-Wuh2 (3 ml/15 kg, 10-5 TCID50/ml) by intramuscular inoculation. Slaughters were carried out at 0 days post-infection (dpi) for uninfected (control) groups, and at 5 or 7 dpi for infected groups. The PAMs for microarray analysis were collected by bronchoalveolar lavage from three uninfected pigs and three infected pigs at 5 dpi. Total of 6 microarrays have been hybridized in this experiment.

Array Platforms
A-AFFY-75
Affymetrix GeneChip Porcine Genome Array [Porcine](6 items)
Sample Attributes
age
5-week-old
breed
Tongcheng
cell type
Pulmonary alveolar macrophage
infection
HP-PRRSV, uninfected
Organism
Sus scrofa
sex
male
Experiment Info
Accession
E-GEOD-22782
GEO ID
GSE22782
Type
transcription profiling by array
Organism
Sus scrofa
Released
June 30, 2012
Updated
July 18, 2012
Submitter
Shanli Zhai、 Ping Zhou、 Bin Wu、 Ping Lin、 Xueying Hu、 Yunbo Jiang、 Jin-Ping Li、 Xuewen Xu、 Bang Liu、 Bang Liu、 Tengfei Jiang、 Xiang Zhou
Analysis Services
Analysis Services

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