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E-GEOD-23381 GSE23381 transcription profiling by array Danio rerio

Transcription profile of zebrafish hand2 (hanS6 allele) mutant embryos at 19hpf

·发布 2010年8月3日 ·更新 2012年3月27日
6
样本数
6
实验数
1
芯片平台
1
相关文献
实验描述

Heart formation requires the fusion of bilateral cardiomyocyte populations as they move toward the embryonic midline. The bHLH transcription factor Hand2 is essential for cardiac fusion; however, the effector genes that execute this function of Hand2 are unknown. Here, we provide the first evidence for a downstream component of the Hand2 pathway that mediates cardiac morphogenesis. Although hand2 is expressed in cardiomyocytes, mosaic analysis demonstrates that hand2 plays a non-autonomous role in regulating cardiomyocyte movement. Gene expression profiles reveal heightened expression of fibronectin 1 (fn1) in hand2 mutant embryos. Reciprocally, overexpression of hand2 leads to decreased Fibronectin levels. Furthermore, reduction of fn1 function enables rescue of cardiac fusion in hand2 mutants: bilateral cardiomyocyte populations merge and exhibit improved tissue architecture, albeit without major changes in apicobasal polarity. Together, our data provide a novel example of a tissue creating a favorable environment for its morphogenesis: the Hand2 pathway establishes an appropriate environment for cardiac fusion through negative modulation of Fn1 levels. Embryos from three independent hand2 mutant (hanS6 allele) heterozyogous crosses were collected. Examination of Tg(myl7:egfp) expression allow sorting of hand2 mutant embryos from their wild-type siblings.

芯片平台
A-AFFY-38
Affymetrix GeneChip Zebrafish Genome Array [Zebrafish](6 例)
样本属性
Organism
Danio rerio
stage
19 hpf
tissue
Whole embryo
实验信息
登记号
E-GEOD-23381
GEO 编号
GSE23381
实验类型
transcription profiling by array
物种
Danio rerio
发布日期
2010年8月3日
更新日期
2012年3月27日
提交者
Zayra Viviana Garavito-Aguilar、 Zayra V Garavito-Aguilar、 Deborah Yelon
分析服务
分析服务

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