Home DatasetsExperiment Details
E-GEOD-24666 GSE24666 transcription profiling by array Rattus norvegicus

Basic helix-loop-helix transcription factor Tcf21 is downstream target of male sex-determining gene SRY

·Released April 25, 2011 ·Updated May 18, 2011
18
Samples
18
Assays
1
Array Platforms
Description

The cascade of molecular events involved in mammalian sex determination has been shown to involve the SRY gene, but specific downstream events have eluded researchers for decades. The current study identifies one of the first direct downstream targets of the male sex-determining factor SRY as the basic-helix-loop-helix (bHLH) transcription factor TCF21. SRY was found to directly associate with the Tcf21 promoter SRY/SOX9 response element both in vitro and in vivo during male sex determination. TCF21 was found to promote an in vitro sex reversal of embryonic ovarian cells to promote precursor Sertoli cell differentiation. Therefore, SRY acts directly on the Tcf21 promoter to, in part, initiate a cascade of events associated with Sertoli cell differentiation and embryonic testis development. We used microarrays to determine genes whose expression was stimulated in rat E13 ovarian cell sub-cultures in the presence of a pCMV-myc-expression plasmid over-expressing the Sry, Tsf21, and/or Tcf12 (Reb-alfa) genes. RNA samples from the control group (untreated E13 rat ovarian cells) are compared to RNA from 4 groups of treated E13 rat ovarian cells: 1) Sry overexpressing, 2) Tcf21 overexpressing, 3) Tcf12 (Reb alfa) overexpressing, and 4) Tcf21 + Tcf12 (Reb-alfa) overexpressing. Untreated E13 testis cell sub-cultures were also analyzed. 3 biological replicates each group.

Array Platforms
A-GEOD-6247
[RaGene-1_0-st] Affymetrix Rat Gene 1.0 ST Array(18 items)
Sample Attributes
age
E13
developmental stage
embryonic
gender
female, male
hybridization date
6-22-10, 6-23-10
Organism
Rattus norvegicus
strain
Sprague-Dawley
sub-cultured
less than 12 times
tissue
ovary, testis
treatment
control, none, Sry overexpression, Tcf12 (Reb-alfa) overexpression, Tcf21 and Tcf12 (Reb-alfa) overexpression, Tcf21 overexpression
treatment time
6 days
Experiment Info
Accession
E-GEOD-24666
GEO ID
GSE24666
Type
transcription profiling by array
Organism
Rattus norvegicus
Released
April 25, 2011
Updated
May 18, 2011
Submitter
Tracy M Clement、 Ramji K Bhandari、 Ingrid Sadler-Riggleman、 Marina I Savenkova、 Michael K Skinner、 Michael K Skinner
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]