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E-GEOD-24728 GSE24728 transcription profiling by array Mus musculus

mCG-PML-RARA alters multipotent hematopoiesis

Submitted Oct. 14, 2010 ·Released Oct. 21, 2010 ·Updated June 10, 2011
13
Samples
13
Assays
1
Array Platforms
Description

Acute promyelocytic leukemia (APL) is associated with PML-RARA expression and late myeloid maturation arrest. The myeloid restriction of PML-RARA dependent leukemia has been recapitulated in multiple mouse models of APL, including PML-RARA expressed from the Ctsg locus (mCG-PR). However, we report here that Ctsg expression is not limited to promyelocytes (as had previously been thought); Ctsg RNA is detectable in KLS cells, and mCG-PR mice express PML-RARA within the same compartment, an event that alters multilineage hematopoiesis. However, these animals only develop myeloid leukemia (consistent with the myeloid restriction of human PML-RARA-associated leukemia). Our results suggest that APL is shaped by myeloid- and development-specific factors that define the ultimate leukemic phenotype rather than PML-RARA acting in a committed myeloid precursor. Bone marrow from individual mice expressing PML-RARA from the murine Ctg locus (mCG-PR) and littermate controls was harvested from both femurs and tibia. Standard cell lysis was performed and total RNA was extracted from the flow sorted KLS and SLAM cells. A total of 13 specimens including 3 x mCG-PR_KLS_6wks, 2 x mCG-PR_KLS_13wks,2 x mCG-PR_SLAM_7wks, 4 x WT_KLS_12-13wks (control) and 2 x WT_SLAM_6wks (control) were analyzed using Affymetrics Mouse Exon 1.0 ST platform.

Array Platforms
A-AFFY-98
Affymetrix GeneChip Mouse Exon 1.0 ST Array [MoEx-1_0-st-v1](13 items)
Sample Attributes
cell type
KLS, SLAM
genotype/variation
mCG-PR N17, wild type
Organism
Mus musculus
strain
Bl/6 Taconic
time of progression
12 wks, 13 wks, 6 wks, 7 wks
tissue
bone marrow
Experiment Info
Accession
E-GEOD-24728
GEO ID
GSE24728
Type
transcription profiling by array
Organism
Mus musculus
Submitted
Oct. 14, 2010
Released
Oct. 21, 2010
Updated
June 10, 2011
Submitter
Lukas Wartman、 Rakesh Nagarajan、 Geoffrey L Uy、 John S Welch、 Timothy J Ley、 Nobish Varghese
Analysis Services
Analysis Services

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