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E-GEOD-25548 GSE25548 transcription profiling by array Mus musculus

Key roles for SRF in embryonic epidermal differentiation

·发布 2011年1月20日 ·更新 2014年6月2日
4
样本数
4
实验数
1
芯片平台
1
相关文献
实验描述

During development, a polarized sheet of epidermal cells undergoes stratification and differentiation to produce the skin barrier. Through mechanisms poorly understood, the process involves adhesion and Notch signaling. To elucidate how epidermal embryogenesis is governed, we conditionally targeted transcription factor serum response factor (SRF), which has been shown to be essential for proper epidermal differentiation in vitro and in vivo. Seeking mechanism, we identified actomyosin-related genes as well-known SRF targets downregulated shortly after ablation. We show that this results in a diminished cortical actomyosin network which fails to regulate the transition of cells from the basal proliferative layer to the suprabasal differentiating layer resulting in an inability of cells to properly execute stratification and differentiation. FACS purification of basal epidermal cells from E16.5 SRF fl/fl ROSA26 YFP fl/fl K14-Cre (cKO) or SRF fl/+ ROSA26 YFP fl/fl K14-Cre (WT) was performed on a FACS Vantage SE system equipped with FACS DiVa software (BD Biosciences). Cells were gated for single events and viability and then sorted according to α6 integrin-PE expression and YFP.

芯片平台
A-AFFY-45
Affymetrix GeneChip Mouse Genome 430 2.0 [Mouse430_2](4 例)
样本属性
age
E16.5
Organism
Mus musculus
strain or line
Rosa26, SRF fl/fl ROSA26 YFP fl/fl K14-Cre
实验信息
登记号
E-GEOD-25548
GEO 编号
GSE25548
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2011年1月20日
更新日期
2014年6月2日
提交者
Elaine Fuchs、 Scott Williams、 Chen Luxemburg、 Amalia Pasolli、 Agnes Viale
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