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E-GEOD-25828 GSE25828 transcription profiling by array Mus musculus

Pten deficiency cooperates with KrasG12D to activate NFkB pathway promoting the development of malignant pancreatic ductal adenocarcinoma

·发布 2011年8月31日 ·更新 2011年9月14日
8
样本数
8
实验数
1
芯片平台
实验描述

Almost all human pancreatic ductal adenocarcinomas (PDACs) are driven by oncogenic Kras and the progression of the disease is characterized by the serial appearance of certain genetic lesions. Mouse models have convincingly shown that Kras mutation induces classical PanIN lesions that can progress to PDAC in the appropriate tumor suppressor background. However, the cooperative mechanism between mutant Kras-dependent signaling surrogates and other oncogenic pathways remains to be fully elucidated in order to devise better therapeutic strategy. Mounting evidence PTEN/PI3K perturbation on PDAC tumorigenesis, we observed frequent PTEN inactivation at both genomic and histopathological levels in primary human PDAC samples. The importance of PTEN/PI3K pathway during the development of PDAC was further supported by genetic studies demonstrating that Pten deficiency in cooperation with Kras activation accelerated the formation of invasive PDAC. Mechanistically, combined Kras mutation and Pten inactivation leads to NFkB activation and subsequent induction of cytokine pathways, accompanied with strong stromal activation and immune cell infiltration. Therefore, PTEN/PI3K pathway dictates the activity of NFkB network and serves as a major surrogate during Kras-mediated pancreatic tumorigenesis. Primary pancreatic ductal epithelial cell cultures were established from 6 week old Pdx1-Cre;LSL-KrasG12D L/+ (n=3) or Pdx1-Cre;LSL-KrasG12D L/+;Pten L/+ (n=5) mice. Total RNA was collected from early passage cells.

芯片平台
A-AFFY-45
Affymetrix GeneChip Mouse Genome 430 2.0 [Mouse430_2](8 例)
样本属性
cell type
primary KrasG12D pancreatic ductal epithelial cells, P7, primary KrasG12D Pten L/+ pancreatic ductal epithelial cells, P4
genotype/variation
Pdx1-Cre;LSL-KrasG12D L/+, Pdx1-Cre;LSL-KrasG12D L/+;Pten L/+
Organism
Mus musculus
strain
FVB/C57B6 mixed backgroud
实验信息
登记号
E-GEOD-25828
GEO 编号
GSE25828
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2011年8月31日
更新日期
2011年9月14日
提交者
Haoqiang Ying
分析服务
分析服务

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