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E-GEOD-27478 GSE27478 transcription profiling by array Mus musculus

Gene expression differences between the pancreatic tissues of Pdx1-Cre;KrasLSL-G12D and Pdx1-Cre;KrasLSL-G12D;IKK2/betaF/F mice

·发布 2012年1月24日 ·更新 2014年5月3日
2
样本数
1
实验数
1
芯片平台
1
相关文献
实验描述

Constitutive Kras and NF-kappaB activation is identified as signature alterations in human pancreatic ductal adenocarcinoma (PDAC). However, the mechanisms of constitutive NF-kappaB activation in KrasG12D-induced PDAC are not yet understood. Here, we report that pancreas-targeted IKK2/beta inactivation inhibited NF-kappaB activation and completely suppressed PDAC development in KrasG12D and KrasG12D;Ink4a/Arf mutant mice, demonstrating a genetic link between IKK2/beta and KrasG12D in PDAC inception. Our findings reveal that KrasG12D-activated AP-1 induces IL-1alpha, which in turn activates NF-kappaB and its target genes IL-1alpha and p62, to initiate IL-1alpha/p62 feedforward loops for inducing and sustaining NF-kappaB activity. Furthermore, IL-1alpha overexpression correlates with Kras mutation, constitutive NF-kappaB activity, and poor survival in PDAC patients. Therefore, our findings establish a pathway linking duel feedforward loops of IL-1alpha/p62 through which IKK2/beta/NF-kappaB is activated by KrasG12D. To study Kras-induced inflammatory responses and to identify differentially expressed genes between the pancreatic tissues of Pdx1-Cre;KrasLSL-G12D and Pdx1-Cre;KrasLSL-G12D;IKK2/betaF/F mice, cDNA microarray analysis was performed.

参考文献
KrasG12D-induced IKK2/β/NF-κB activation by IL-1α and p62 feedforward loops is required for development of pancreatic ductal adenocarcinoma.
Ling J, Kang Y, Zhao R, Xia Q, Lee DF, Chang Z, Li J, Peng B, Fleming JB, Wang H, Liu J, Lemischka IR, Hung MC, Chiao PJ
PMID: 22264792
芯片平台
A-MEXP-724
Agilent Whole Mouse Genome Microarray 4x44K 014868 G4122F (annotation from 02.2007)(1 例)
样本属性
BioSourceProvider
Jianhua Ling
genotype
Pdx1-Cre;KrasLSL-G12D, Pdx1-Cre;KrasLSL-G12D;IKK2/betaF/F
Organism
Mus musculus
organism part
normal pancreas, pancreatic tumor
strain or line
C57BL/6 and 129
实验信息
登记号
E-GEOD-27478
GEO 编号
GSE27478
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2012年1月24日
更新日期
2014年5月3日
提交者
Jianhua Ling、 Huamin Wang、 Qianghua Xia、 Paul J Chiao、 Ruiying Zhao、 Ya'an Kang、 Bailu Peng、 Jasson B Fleming、 Paul J Chiao、 Zhe Chang、 Mien-Chie Hung
分析服务
分析服务

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