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E-GEOD-3013 GDS1510, GDS1508, GSE3013 transcription profiling by array Homo sapiens

Transcription profiling of endometrial epithelial cells (EECs) to understand actions of tamoxifen in the uterus and its molecular effectors in endometrial carcinogenesis

·Released Sept. 8, 2007 ·Updated May 2, 2014
16
Samples
16
Assays
2
Array Platforms
1
References
Description

The molecular explanation for tamoxifen serving as a breast cancer treatment but displaying partial estrogenic in the uterus is not known. Previously, we reported that differential promoter context and cofactor recruitment contribute to the tissue specificity of tamoxifen. Here, we investigated the genomic basis for the partial oestrogenic activity of tamoxifen in the endometrium. We showed that tamoxifen not only affects the rate of transcription of oestrogen target genes but also targets a unique set of genes. Since oestrogen and tamoxifen are both able to bind to oestrogen receptors (ERs) and because both promote endometrial carcinogenesis, we hypothesized that the molecular effectors for ERs in endometrial carcinogenesis most likely reside in genes that are commonly targeted by oestrogen and tamoxifen. Among those target genes, we identified a paired-box gene PAX2 that is critically involved in cell proliferation and carcinogenesis in the endometrium. Our experiments also demonstrated that PAX2 is activated by oestrogen and tamoxifen in endometrial carcinomas but not in normal endometrium, and this activation is associated with cancer-linked hypomethylation of the PAX2 promoter. Experiment Overall Design: each experiment repeat 2 times.

References
Hypomethylation-linked activation of PAX2 mediates tamoxifen-stimulated endometrial carcinogenesis.
Huijian Wu, Yupeng Chen, Jing Liang, Bin Shi, Ge Wu, Ying Zhang, Dan Wang, Ruifang Li, Xia Yi, Hua Zhang, Luyang Sun, Yongfeng Shang
PMID: 16355216
Array Platforms
A-AFFY-1
Affymetrix GeneChip Human Genome U95Av2 [HG_U95Av2](10 items)
A-AFFY-9
Affymetrix GeneChip Human Genome U95A [HG_U95A](6 items)
Sample Attributes
CellType
epithelial cells
DiseaseStaging
Stage I, Stage II
DiseaseState
endometrioid carcinoma
Organism
Homo sapiens
OrganismPart
endometrium
Experiment Info
Accession
E-GEOD-3013
GEO ID
GDS1510, GDS1508, GSE3013
Type
transcription profiling by array
Organism
Homo sapiens
Released
Sept. 8, 2007
Updated
May 2, 2014
Submitter
Yongfeng Shang
Analysis Services
Analysis Services

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