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E-GEOD-3067 GSE3067, GDS2371 transcription profiling by array Mus musculus

Transcription profiling of hearts from wild type and thyroid hormone receptor beta-mutant mice (d337T TRb) treated with or without PPARalpha activator to study the molecular effect of thyroid hormone receptor on PPARalpha activation

Submitted Aug. 5, 2005 ·Released Nov. 22, 2007 ·Updated March 27, 2012
28
Samples
28
Assays
1
Array Platforms
1
References
Description

In this study we used the d337T TRb transgenic mouse that has been created to reproduce the human genetic disease known as resistance to thyroid hormone (RTH) as a model to determine if the d337T TRb mutation would have an effect on PPARa activation. A single amino acid deletion (d337T) abrogates thyroid hormone (T3) binding and transforms the thyroid hormone receptor (TRb) into a constitutive repressor. The principle goal was to determine if T3 regulates myocardial energy metabolism through its nuclear receptors. We introduced a known PPARa activator (WY14, 643) into control and d337T TRb transgenic mice then examined cardiac gene expression using Affymetrix 430_2 expression arrays and RT-PCR. We compared the gene expression of PPARa, RXRb and TRa,b and three PPARa target genes among four studies groups [control, control with WY14, 643, d337T TRb, and d337T TRb with WY14, 643] consisting of seven mice per group. Microarray analysis revealed that these genes responded to the WY14, 643 treatments of control and d337T TRb mice. Analysis of the array and RT-PCR data indicates that mRNA expression levels of PPARa and mRXRb decrease after a six hour drug treatment in both control and d337T TRb mice (P<0.01) as did the array mRNA expression levels for TRa & b (P<0.025). Three target genes (AMPD3, PDK4 and UCP3) of PPARa were up regulated in control and down regulated in the d337T TRb transgenic mouse, indicating a direct action on these metabolic genes when the TRb becomes a repressor. In conclusion, PPARa activation by WY14, 643 has a positive effect on control mice and a negative effect on the TRb transgenic mice which supports our hypothesis that T3 regulates myocardial energy metabolism through its nuclear receptors. Experiment Overall Design: 7 control, 7 deletion strain individuals, 7 controls with a PPARalpha activator, 7 deletion strain individuals with a PPARalpha activator

References
The dominant negative thyroid hormone receptor beta-mutant {Delta}337T alters PPAR{alpha} signaling in heart.
Norman E Buroker, Martin E Young, Caimiao Wei, Kyle Serikawa, Ming Ge, Xue-Han Ning, Michael A Portman
PMID: 16985257
Array Platforms
A-AFFY-45
Affymetrix GeneChip Mouse Genome 430 2.0 [Mouse430_2](28 items)
Sample Attributes
GeneticModification
transgenic
Organism
Mus musculus
OrganismPart
heart
StrainOrLine
d337T TRb, wild type
Experiment Info
Accession
E-GEOD-3067
GEO ID
GSE3067, GDS2371
Type
transcription profiling by array
Organism
Mus musculus
Submitted
Aug. 5, 2005
Released
Nov. 22, 2007
Updated
March 27, 2012
Submitter
Norman Buroker
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