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E-GEOD-31152 GSE31152 transcription profiling by array Homo sapiens

Perivascular Human Endometrial Mesenchymal Stem Cells Express Pathways Relevant to Self-Renewal, Lineage Specification, and Functional Phenotype

·发布 2011年11月14日 ·更新 2012年6月25日
15
样本数
15
实验数
1
芯片平台
1
相关文献
实验描述

A population of endometrial cells displaying key properties of mesenchymal stem cells (eMSC) has been identified in human endometrium. eMSC co-express CD146 and PDGFRB surface markers, have a perivascular location, and likely represent the reservoir of progenitors giving rise to the endometrial stromal fibroblast lineage. Endometrial stromal cells isolated from 16 oocyte donors and 3 benign gynecologic surgery subjects were FACS sorted into four populations: CD146+/PDGFRB+ (eMSC); CD146+/PDGFRB- (endothelial cells); CD146-/PDGFRB+ (stromal fibroblasts); CD146-/PDGFRB- (mixed population) then subjected to gene expression analysis on Affymetrix Human Gene 1.0 ST arrays, and differentially expressed genes compared between eMSC, stromal fibroblast, and endothelial cell populations. Ninety-two genes were validated by multiplex quantitative RT-PCR on seventy of these sorted cell populations. Immunohistochemistry was used to verify the perivascular location of eMSCs.Principal component analysis and hierarchical clustering showed eMSC clustering discretely near stromal fibroblasts and separately from endothelial cells. eMSC expressed pericyte markers and genes involved hypoxia response, inflammation, proteolysis, and angiogenesis/vasculogenesis – all relevant to endometrial tissue breakdown and regeneration. Additionally, eMSC displayed distinct gene profiles for cell-cell communication and regulation of gene expression. Overall, the phenotype of the eMSC is that of a multipotent pericyte responsive to hypoxic, proteolytic, and inflammatory stimuli, able to induce angiogenesis, migrate and differentiate into lineage cells, and potentially respond to estradiol and progesterone. Identifying the pathways and gene families described herein in the context of the endometrial niche, will be valuable in understanding normal and abnormal endometrial development in utero and differentiation in adult uterus. The multipotent, perivascular endometrial mesenchymal stem cell has a “niche phenotype” of high Notch, TGFB, IGF, and Hedgehog and low canonical/non-canonical Wnt and EGF signaling. Oocyte donors with no known uterine pathology underwent endometrial biopsy at the time of oocyte retrieval, following comparable GnHR agonist downregulated ovarian stimulation protocols. Tissue was digested and stromal cells isolated and sorted based on expression of CD146 and PDGFRB. RNA was extracted and hybridized on Affymetrix microarrays. Resulting data were compared between sorted isolated cell populations.

参考文献
Perivascular human endometrial mesenchymal stem cells express pathways relevant to self-renewal, lineage specification, and functional phenotype.
Spitzer TL, Rojas A, Zelenko Z, Aghajanova L, Erikson DW, Barragan F, Meyer M, Tamaresis JS, Hamilton AE, Irwin JC, Giudice LC
PMID: 22075475
芯片平台
A-AFFY-141
Affymetrix GeneChip Human Gene 1.0 ST Array [HuGene-1_0-st-v1](15 例)
样本属性
age (years)
24, 26, 29
cd146 and pdgfrb expression
CD146+/PDGFRB+, CD146+/PDGFRB-, CD146-/PDGFRB+
cycle day
13, 14
Organism
Homo sapiens
organism part
endometrium
phase
Early Secretory, Interval, Proliferative
实验信息
登记号
E-GEOD-31152
GEO 编号
GSE31152
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
2011年11月14日
更新日期
2012年6月25日
提交者
Angela Rojas、 Lusine Aghajanova、 Trimble L Spitzer、 Michelle Meyer、 David Erikson、 Fatima Barragan、 Zara Zelenko、 Linda C Giudice、 Amy E Hamilton、 Juan C Irwin、 Linda Giudice
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分析服务

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