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E-GEOD-31253 GSE31253 transcription profiling by array Lactobacillus plantarum WCFS1

The CtsR and HrcA regulon of Lactobacillus plantarum WCFS1 at normal and elevated temperature Nov 01, 2011 approved

·Released Jan. 1, 2012 ·Updated May 2, 2014
48
Samples
24
Assays
1
Array Platforms
Description

Transcriptome profiles of control Lactobacillus plantarum WCFS1 cells were compared with ctsR, hrcA, and ctsR-hrcA deletion mutants grown in MRS media at 28 and 40 degrees Celcius. Continuous cultures were performed in duplo on MRS media and whole genome transcriptome analysis was performed on the WCFS1 (WT), NZ3410CM (harboring a chlooramphenicol resistance marker (cat) replacement mutation in ctsR, dc), NZ3425CM (harboring a cat replacement mutation in hrcA, dh), and NZ3423 (harboring deletion mutation in ctsR and a cat replacement mutation inhrcA, dcdh) strains.

Array Platforms
A-GEOD-13984
Lactobacillus plantarum WCFS1 15K 60-mer array, Version 3.1, our ID LPAG3.1_8(24 items)
Sample Attributes
genotype
ctsR deletion mutant, ctsR mutant, hrcA mutant, WT
Organism
Lactobacillus plantarum WCFS1
strain
NZ3410CM, NZ3423CM, NZ3425CM, WCFS1
Experiment Info
Accession
E-GEOD-31253
GEO ID
GSE31253
Type
transcription profiling by array
Organism
Lactobacillus plantarum WCFS1
Released
Jan. 1, 2012
Updated
May 2, 2014
Submitter
Michiel Wels、 Hermien v van de Veen、 Peter Bron、 Roger S Bongers、 Michiel Wels、 Michiel Kleerebezem
Analysis Services
Analysis Services

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