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E-GEOD-32277 GSE32277 transcription profiling by array Mus musculus

Kras is required for pancreatic tumor maintenance through regulation of hexosamine biosynthesis and the non-oxidative pentose phosphate pathway

·发布 2012年4月29日 ·更新 2012年6月25日
33
样本数
33
实验数
1
芯片平台
1
相关文献
实验描述

The maintenance of advanced malignancies relies on continued activity of driver oncogenes, although their rate-limiting role is highly context-dependent with respect to tumor types and associated genetic alterations. Oncogenic Kras mutation is the signature event in human pancreatic ductal adenocarcinoma (PDAC), serving a critical role in tumor initiation. Here, an inducible KrasG12D-driven p53 mutant PDAC mouse model establishes that advanced PDAC remains strictly dependent on continued KrasG12D expression and that KrasG12D serves a vital role in the control of tumor metabolism, through stimulation of glucose uptake and channeling of glucose intermediates through the hexosamine biosynthesis pathway (HBP) and the pentose phosphate pathway (PPP). Notably, these studies reveal that oncogenic Kras regulates ribose biogenesis. Unlike canonical models of PPP-mediated ribose biogenesis, we demonstrate that oncogenic Kras drives intermediates from enhanced glycolytic flux into the non-oxidative arm of the PPP, thereby decoupling ribose biogenesis from NADPNADPH-mediated redox control. Together, this work provides in vivo mechanistic insights into how oncogenic Kras promotes metabolic reprogramming in native tumors and illuminates potential metabolic targets that can be exploited for therapeutic benefit in Kras-driven PDAC. Primary pancreatic tumor lines were established from p48Cre tetO_LKrasG12D ROSA_rtTAL+ p53L+ mice. Five independent tumor lines (iKras1-5) were used for pancreatic injection into nude mice to generate orthotopic tumors. The mice were kept on doxycycline for 2 weeks until obvious tumor formation. Half of the animals were pulled off doxycycline for 24 hours. Tumors with over 75% cellularity were collected for total RNA prepartion. For in vitro expression profiles, the same five tumor lines were cultured in the presence or absence of doxycycline for 24 hours and total cellular RNA was prepared. For control samples, two independent tumor lines from LSL-KrasG12D p53L+ tumors were cultured in the presence or absence of doxycycline for 24 hours and total cellular RNA was prepared.

参考文献
Oncogenic Kras maintains pancreatic tumors through regulation of anabolic glucose metabolism.
Ying H, Kimmelman AC, Lyssiotis CA, Hua S, Chu GC, Fletcher-Sananikone E, Locasale JW, Son J, Zhang H, Coloff JL, Yan H, Wang W, Chen S, Viale A, Zheng H, Paik JH, Lim C, Guimaraes AR, Martin ES, Chang J, Hezel AF, Perry SR, Hu J, Gan B, Xiao Y, Asara JM, Weissleder R, Wang YA, Chin L, Cantley LC, DePinho RA
PMID: 22541435
芯片平台
A-AFFY-45
Affymetrix GeneChip Mouse Genome 430 2.0 [Mouse430_2](33 例)
样本属性
background strain
FVB/B6 mix
cell type
culture of LSL-Kras1, culture of LSL-Kras2, pancreatic xenograft tumor generated from iKras1, pancreatic xenograft tumor generated from iKras2, pancreatic xenograft tumor generated from iKras3, pancreatic xenograft tumor generated from iKras4, pancreatic xenograft tumor generated from iKras5, parental culture of iKras1, parental culture of iKras2, parental culture of iKras3, parental culture of iKras4, parental culture of iKras5
genotype
p48Cre tetO_LKrasG12D ROSA_rtTAL+ p53L+
Organism
Mus musculus
实验信息
登记号
E-GEOD-32277
GEO 编号
GSE32277
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2012年4月29日
更新日期
2012年6月25日
提交者
Ron DePinho、 Sujun Hua、 Sujun Hua、 Haoqiang Ying
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