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E-GEOD-33448 GSE33448 transcription profiling by array Homo sapiens

BW001

·发布 2012年4月30日 ·更新 2014年5月3日
8
样本数
4
实验数
1
芯片平台
实验描述

E2F transcription factors are known to be important for timely activation of G1/S and G2/M genes required for cell cycle progression, but transcriptional mechanisms for deactivation of cell cycle-regulated genes are unknown. Here, we show that E2F7 is highly expressed during mid to late S-phase, occupies promoters of G1/S-regulated genes and represses their transcription. ChIP-seq analysis revealed that E2F7 binds preferentially to genomic sites containing the TTCCCGCC motif, which closely resemble the E2F consensus site. We identified 89 target genes that carry E2F7 binding sites close to the transcriptional start site and that are directly repressed by short term induction of E2F7. Most of these target genes are known to be activated by E2Fs and are involved in DNA replication, metabolism and DNA repair. Importantly, induction of E2F7 during G0-G1/S resulted in S-phase arrest and DNA damage, whereas expression of E2F7 during G2/M failed to disturb cell cycle progression. These findings provide strong evidence that E2F7 directly controls the downswing of oscillating G1/S genes during S-phase progression. Overexpression of E2F7 was studied in a doxycyclin-inducable system. Four cellcultures were treated with and without doxycyclin and RNA was isolated to run direct comparisons on a 2-channel human expression microarray.

芯片平台
A-GEOD-13183
A-UMCU-H25k-1.0(4 例)
样本属性
cell line
T-REx HeLa
modification
BW001-control, BW001-E2F7
Organism
Homo sapiens
实验信息
登记号
E-GEOD-33448
GEO 编号
GSE33448
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
2012年4月30日
更新日期
2014年5月3日
提交者
Frank Holstege、 Marian Groot Koerkamp、 Marian Groot Koerkamp、 Edwin Cuppen、 Alain de Bruin、 Michal Mokry、 Bart Westendorp
分析服务
分析服务

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