Home DatasetsExperiment Details
E-GEOD-40022 GSE40022 transcription profiling by array Mus musculus

Expression and function of PML-RARA in the multipotent hematopoietic progenitor cells of Ctsg-PML-RARA mice

·Released Aug. 13, 2012 ·Updated Aug. 20, 2012
69
Samples
69
Assays
1
Array Platforms
Description

Because PML-RARA-positive acute promyelocytic leukemia (APL) is a morphologically differentiated leukemia, much speculation has been made about whether its leukemic cell of origin might be committed myeloid precursor (e.g., a promyelocyte) vs. a hematopoietic stem/progenitor cell (HSPC). We originally targeted PML-RARA expression with CTSG regulatory elements, based on the early observation that this gene was maximally expressed in cells with promyelocyte morphology. Here, we show that both Ctsg and PML-RARA targeted to the Ctsg locus (in Ctsg-PML-RARA mice) are detected in the purified KLS cells of these mice (Kit+Lin-Sca+ cells, which are highly enriched for HSPCs), and this expression results in biological effects in multi-lineage competitive repopulation assays. Although PML-RARA is indeed expressed at high levels in the promyelocytes of Ctsg-PML-RARA mice, it does not significantly alter the transcriptional signature of these cells, or induce their self-renewal. In sum, these results suggest that in murine models, PML-RARA acts primarily to affect the function of multi-potent progenitor cells, rather than promyelocytes. Since PML/Pml is normally expressed in the HSPCs of both humans and mice, and since some human APL samples contain TCR rearrangements and express T lineage genes, we suggest that the very early hematopoietic expression of PML-RARA in our mouse model may closely mimic the physiologic expression pattern of PML-RARA in human APL patients. Bone marrow from individual mice expressing PML-RARA from the murine Ctg locus (mCG-PR) and littermate controls was harvested from both femurs and tibia. Standard cell lysis was performed, and total RNA was extracted from the cells and analyzed using the Affymetrix Mouse Exon 1.0 ST platform.

Array Platforms
A-AFFY-98
Affymetrix GeneChip Mouse Exon 1.0 ST Array [MoEx-1_0-st-v1](69 items)
Sample Attributes
background
Bl/6, Bl/6 Taconic
cell type
common myeloid progenitors, granulocyte monocyte progenitor, KLS, megakaryocyte erythrocyte progenitor, murine acute promyelocytic leukemia, neutrophil, promyelocyte, SLAM
Organism
Mus musculus
organism part
bone marrow, spleen
time of progression
10 wks, 12 wks, 13 wks, 238 days, 252 days, 277 days, 294 days, 295 days, 309 days, 313 days, 334 days, 335 days, 338 days, 344 days, 367 days, 393 days, 553 days, 6 wks, 7 wks, 9 wks
variation
Ctsg KO N10, mCG-PR N10, mCG-PR N17, mCG-PR N22, mCG-PR N24, WT
Experiment Info
Accession
E-GEOD-40022
GEO ID
GSE40022
Type
transcription profiling by array
Organism
Mus musculus
Released
Aug. 13, 2012
Updated
Aug. 20, 2012
Submitter
Nobish Varghese、 Jeffery M Klco、 Nobish Varghese、 Rakesh Nagarajan、 John S Welch、 Timothy J Ley、 Lukas Wartman、 Geoffrey L Uy
Analysis Services
Analysis Services

Contact

No. 2 Wenbo Road, Zhangqiu District, Jinan, Shandong

Qilu Normal University · Genelibs Bioinformatics Lab

750 Shunhua Rd, Jinan

2F, Bldg F, University Science Park

Tel: 0531-88819269

WeChat Official Account

Follow our WeChat subscription account for real-time updates and the latest in medical and biological research.


Business Email

E-mail: [email protected]