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E-GEOD-40566 GSE40566 transcription profiling by array Mus musculus

Gene Expression Profiles of Lymphocytes Obtained from Mice treated with Glatimer Acetate and ither Glatiramatoids

·发布 2013年8月1日 ·更新 2014年6月2日
105
样本数
105
实验数
1
芯片平台
实验描述

Glatiramer acetate (GA; Copaxone), is a complex mixture of synthetic polypeptides approved for treatment of multiple sclerosis (MS). GA is an altered peptide ligand (APL) of myelin basic protein (MBP), an encephalitic autoantigen implicated in MS. GA induces GA-reactive T cells, which upregulate expression of anti-inflammatory and neurotrophic substances in the CNS. The antigenic sequences in glatiramoids cannot be completely characterized; nevertheless, differences among them can cause toxicity. We conducted microarray analyses to determine whether gene expression by GA-reactive lymphocytes from mouse spleens could differentiate GA from other glatiramoids. Expression of 135 genes was unique to cells reactivated by GA vs by intentionally altered GA and other glatiramoids. Significantly (p<0.01) altered expression of 207 genes was observed by cells reactivated by GA vs purported generic GA. Some APLs of MBP have caused serious adverse effects in MS patients. The influence of altered gene expression on glatiramoid safety warrants further investigation. Glatiramoid samples for SPL cell activation were grouped into four categories: 1) Verified GA, which included GA-RS (22 samples) and GA drug product (GA-DP, 34 samples from 30 batches) manufactured by Teva; 2) Deliberately Modified GA (DM-GA; 9 samples), which included glatiramoids made by Teva that were similar to GA but modified in a variety of ways: prepared with different ingredients (e.g., missing a constituent amino acid); prepared with the same amino acids in the same molar ratio as GA, but with defined amino acid sequences and different molecular weights (referred to as peptide markers TV-35 and TV-66); synthesized by a different process (e.g., changing acetolytic cleavage conditions, alternating polymerization initiator); exposed to destabilizing conditions (e.g., degradation by acid, base, and heat); 3) Unverified Glatiramoids, which included 4 samples, TV-5010 and 3 glatiramoids synthesized to be similar to GA but not manufactured using the Teva-patented manufacturing process; and 4) Unverified Generic GA, which included samples from 2 glatiramoids (“GA-N” 11 samples from 5 different batches, and 2 “GA-C” samples from a single batch) marketed as generic GA manufactured by companies other than Teva .

芯片平台
A-MEXP-1175
Illumina MouseWG-6 v2.0 Expression BeadChip(105 例)
样本属性
group
Background, Deliberately Modified GA, other, Unverified Generic GA, Unverified Glatiramoid, Verified GA
organism
Mus musculus
实验信息
登记号
E-GEOD-40566
GEO 编号
GSE40566
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2013年8月1日
更新日期
2014年6月2日
提交者
Inbar Plaschkes、 Inbar Plaschkes、 Shlomo Bakshi、 Igor Perevozkin、 Riki Schwartz、 Vered C Caspi
分析服务
分析服务

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