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E-GEOD-40614 GSE40614 transcription profiling by array Homo sapiens

Id1 knockdown in primary human glioma stem cells

·Released Sept. 5, 2013 ·Updated June 2, 2014
12
Samples
12
Assays
1
Array Platforms
Description

Abnormal activation of stemness factors is a crucial signature of cancer stem cells (CSCs), a highly tumorigenic subpopulation in malignant tumors. However, it is unclear whether multi-signaling pathways are activated in CSCs, as like normal stem cells. I would like to report that an inhibitor of differentiation 1 (ID1) activates intracellular multi-signaling involved in proliferation, genesis, and maintenance of glioma stem cells (GSCs) by suppression of Cullin3, an E3 ubiquitin ligase that degrades Cyclin E and components of SHH and WNT signaling. ID1 inhibits BMP-dependent differentiation of GSCs by activation of BMPR2-targeting miR17/20a. ID1HIGH-Cullin3LOW signature correlates with a poor prognosis of GBM patients with a significant association to gene signatures enriched in EGF, WNT, SHH, and BMP signaling. Combinational inhibition of GSC intracellular multi-signaling network increases tumor-bearing mice survival. These results provide insights on molecular and cellular basis of GSC biology, and also suggest necessity of multi-signaling inhibition for GSCs therapy. Two human primary glioma stem cells (GSCs) such as GSC2 and GSC8 were isolated from two individual primary human glioma specimens. The GSCs were directly transfected with pSuper-GFP-ID1-shRNA and pSuper-GFP-Scrambled-shRNA using FuGENE 6 reagent (Roche). The RNA extraction in these cells was used to analyze gene expression.

Array Platforms
A-MEXP-1172
Illumina HumanRef-8 v3.0 Expression BeadChip(12 items)
Sample Attributes
cell line
GSC2 cells, GSC8 cells
cell type
glioma stem cells
organism
Homo sapiens
transfection
pSuper-GFP-ID1-shRNA, pSuper-GFP-Scramble-shRNA
Experiment Info
Accession
E-GEOD-40614
GEO ID
GSE40614
Type
transcription profiling by array
Organism
Homo sapiens
Released
Sept. 5, 2013
Updated
June 2, 2014
Submitter
Xiong Jin、 Xiong Jin、 Xun Jin
Analysis Services
Analysis Services

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