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E-GEOD-43375 GSE43375 transcription profiling by array Rattus norvegicus

Striatal molecular signature of subchronic subthalamic nucleus high frequency stimulation in parkinsonian rat

·发布 2013年5月1日 ·更新 2014年6月2日
12
样本数
12
实验数
1
芯片平台
实验描述

This study addresses the molecular mechanisms underlying the action of subthalamic nucleus high frequency stimulation (STN-HFS) in the treatment of Parkinson’s disease and its interaction with levoDOPA (L-DOPA), focusing on the striatum. The objectives were 1) to identify the molecular signature of STN-HFS action at striatal level, associated with its efficient antiparkinsonian action, and 2) to investigate the molecular substrates of the interaction between the two treatments in order to evidence possible genes involved in dyskinesia. Striatal gene expression profile was assessed in rats with nigral DOPAmine neuron lesion, either treated or not, using agilent microarrays and qPCR verification. The treatments consisted in anti-akinetic STN-HFS (5 days), chronic L-DOPA treatment inducing dyskinesia (LIDs) or the combination of the two treatments that exacerbated LIDs. STN-HFS modulated 71 genes with functional or biochemical annotation, including genes sharing the GO terms regulation of growth, regulation of apoptosis, extracellular region. Ttr, Igf2, Sostdc1 and Nr4A3 (Nor-1), are among the 5 genes showing the highest specific upregulation. Down-regulated genes include Prkcd, Sirt5 and Bbc3. These results show that genes involved in neuroprotection and/or neurogenesis are key components of STN-HFS action in the striatum. STN-HFS and LDOPA treatment share very few common gene regulation features suggesting that the molecular substrates underlying their striatal action are mostly different. In addition to genes already reported to be associated with LIDs (Pdyn, Trh, Grm4/mGlu4, Cnr1/CB1), the comparison between DOPA and DOPA/STN-HFS identifies immunity-related genes: C1s, Rt1-Da and Irf7a, as potential players in L-DOPA side effects. Total RNA was extracted from striatal tissue from four groups of 3 animals bearing 6-hydroxyDOPAmine (6-OHDA)-induced lesion of the nigrostriatal DA pathway: lesion alone without any subsequent treatment (L), L-DOPA treatment for 19 days (D), STN-HFS for 5 days (S) and combination of L-DOPA and STN-HFS (DS).

芯片平台
A-MEXP-784
Agilent Whole Rat Genome Microarray 4x44K 014879 G4131F(12 例)
样本属性
l-dopa treatment
no, yes
organism
Rattus norvegicus
organism part
striatum
sex
male
stn-hfs
no, yes
实验信息
登记号
E-GEOD-43375
GEO 编号
GSE43375
实验类型
transcription profiling by array
物种
Rattus norvegicus
发布日期
2013年5月1日
更新日期
2014年6月2日
提交者
Catherine Nguyen、 Nicolas Boulanger、 Sylviane Lortet、 Sylviane Lortet、 Pascal Salin、 Emilie Lacombe、 Pascal Rihet、 Lydia Kerkerian-Le Goff
分析服务
分析服务

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