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E-GEOD-44416 SRP018767, GSE44416 ChIP-seq Homo sapiens

Genome-wide binding of TEAD4 in gastric cancer cell lines MKN28 and SNU216

·Released Jan. 2, 2014 ·Updated Jan. 23, 2014
4
Samples
4
Assays
1
References
Description

To access target binding sites of TEAD4 in gastric cancer, TEAD4 binding was investigated using MKN28 and SNU216 cell lines by ChIP-seq. MKN28 and SNU216 cell lines were cross-linked with formaldehyde, fractionated by sonication and immunoprecipitated by TEAD4 antibody. Immunoprecipitated DNA was prepared by generating libraries and sequenced by massive parallel sequencing.

References
Integrative genomics analysis reveals the multilevel dysregulation and oncogenic characteristics of TEAD4 in gastric cancer.
Lim B, Park JL, Kim HJ, Park YK, Kim JH, Sohn HA, Noh SM, Song KS, Kim WH, Kim YS, Kim SY
PMID: 24325916
Sample Attributes
cell line
MKN28, SNU216
cell type
gastric cancer cell
chip antibody
none, TEAD4 (Abnova, H00007004-M01, 11105-5H3)
organism
Homo sapiens
Experiment Info
Accession
E-GEOD-44416
GEO ID
SRP018767, GSE44416
Type
ChIP-seq
Organism
Homo sapiens
Released
Jan. 2, 2014
Updated
Jan. 23, 2014
Submitter
Yong-Sung Kim、 Seon-Young Kim、 Byungho Lim、 Byungho Lim
Analysis Services
Analysis Services

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