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E-GEOD-44593 GSE44593 transcription profiling by array Homo sapiens

Molecular Evidence for a Dimensional Basis of Depression

·发布 2016年7月3日 ·更新 2016年12月28日
28
样本数
28
实验数
1
芯片平台
实验描述

Here we identified a set of genes with frequent expression changes in the postmortem brain of MDD subjectsand show that this gene set is genetically related to brain and organ illnesses frequently associated with MDD. Specifically, we performed a meta-analysis of eight gene array studies in three corticolimbic brain regions and identified ~450 genes frequentlyderegulated in MDD (n=103 subjects, 50.5%MDD). These “MetaA-MDD” genes includepreviously-implicated neuroplasticity- and stress-related genes (CRH, BDNF, VGF), encompass multiple synaptic and signaling pathways, and suggests complex changes in cell structure and function. MetaA-MDD genes display low connectivity andhubnessin coexpression networks andare evenly distributed throughout the genome. However, MetaA-MDD genesare significantly over-represented in gene sets identified by the genome-wide association studies for brain disorders and organ diseases sharing clinical co-morbidity with MDD (e.g., cardiovascular, metabolic syndrome), but not for other diseases or body functions. Together, this study describes a robustmolecular characterization of altered brain function in MDD, and provides evidence for a shared genetic structure linking MDD andrelated illnesses, together biologically defining abroader dimensional definition ofa depressive-like syndrome. 14 pairs of human postmotem AMY samples of MDD patients and control

芯片平台
A-AFFY-44
Affymetrix GeneChip Human Genome U133 Plus 2.0 [HG-U133_Plus_2](28 例)
样本属性
disease status
control, MDD
organism
Homo sapiens
organism part
human_brain_AMY
pair
1, 11, 12, 13, 14, 15, 16, 2, 3, 4, 7, 8, 9
Sex
male
实验信息
登记号
E-GEOD-44593
GEO 编号
GSE44593
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
2016年7月3日
更新日期
2016年12月28日
提交者
YING DING、 Etienne Sibille
分析服务
分析服务

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