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E-GEOD-45018 GSE45018 transcription profiling by RT-PCR Homo sapiens

Comparison between HuT78 parental and romidpepsin-selected cell lines

·发布 2013年3月12日 ·更新 2014年6月11日
3
样本数
3
实验数
1
芯片平台
1
相关文献
实验描述

Gene expression values were determined for HuT78 parental cells and cells selected with romidpesin in the presence of P-glycoprotein inhibitors. HuT78 DpVp35 cells are maintained in 35 ng/ml romidepsin with 2.5 µg/ml verapamil and HuT78 DpP100 cells are maintained in 100 ng/ml romidepsin with 1 µM valspodar To identify molecular determinants of histone deacetylase inhibitor (HDI) resistance, we selected HuT78 cutaneous T-cell lymphoma (CTCL) cells with romidepsin in the presence of P-glycoprotein (Pgp) inhibitors to prevent transporter upregulation. Resistant sublines were 250- to 385-fold resistant to romidepsin and were resistant to apoptosis induced by apicidin, entinostat, panobinostat, belinostat and vorinostat. A custom Taqman array identified increased insulin receptor (INSR) gene expression; immunoblot analysis confirmed increased expression and a 4- to 8-fold increase in mitogen activated protein kinase (MAPK) kinase (MEK) phosphorylation in resistant cells compared to parental cells. Resistant cells were exquisitely sensitive to MEK inhibitors and apoptosis correlated with restoration of proapoptotic Bim. Romidepsin combined with MEK inhibitors yielded greater apoptosis in cells expressing mutant KRAS compared to romidepsin treatment alone. Gene expression analysis of samples obtained from patients with CTCL enrolled on the NCI1312 Phase II study of romidepsin in T-cell lymphoma suggested perturbation of the MAPK pathway by romidepsin. Immunohistochemical analysis of Bim expression demonstrated decreased expression in some skin biopsies at disease progression. These findings implicate increased activation of MEK and decreased Bim expression as a resistance mechanism to HDIs, supporting combination of romidepsin with MEK inhibitors in clinical trials. Gene expression in resistant lines was compared to parental lines

参考文献
MAPK pathway activation leads to Bim loss and histone deacetylase inhibitor resistance: rationale to combine romidepsin with an MEK inhibitor.
Chakraborty AR, Robey RW, Luchenko VL, Zhan Z, Piekarz RL, Gillet JP, Kossenkov AV, Wilkerson J, Showe LC, Gottesman MM, Collie NL, Bates SE
PMID: 23532732
芯片平台
A-GEOD-16778
Human MDR resistance in cancer qRT-PCR array(3 例)
样本属性
cell type
Romidepsin-resistant Sezary syndrome cell line, Sezary syndrome cell line
genotype
HuT78, HuT78 DpP100, HuT78 DpVp35
organism
Homo sapiens
实验信息
登记号
E-GEOD-45018
GEO 编号
GSE45018
实验类型
transcription profiling by RT-PCR
物种
Homo sapiens
发布日期
2013年3月12日
更新日期
2014年6月11日
提交者
Nathan L Collie、 Michael M Gottesman、 Jean-Pierre Gillet、 Ribert W Robey、 Julia Wilkerson、 Louise C Showe、 Richard L Piekarz、 Susan E Bates、 Andrew V Kossenkov、 Robert Robey、 Victoria L Luchenko、 Arup R Chakraborty、 Robert W Robey、 Zhirong Zhan
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