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E-GEOD-45904 GSE45904 transcription profiling by array Homo sapiens

Human cystatin D (CST5) locates in the nucleus at sites of active transcription and regulates gene expression

·Released Nov. 4, 2015 ·Updated Nov. 24, 2015
4
Samples
4
Assays
1
Array Platforms
1
References
Description

Cystatin D (CST5) is an inhibitor of several proteases of the cathepsin family that inhibits cell proliferation, migration and invasion of colon carcinoma cells. Some of these effects are unrelated to its antiprotease activity. Here, we use genome-wide expression microarrays to show that cystatin D regulates gene expression (including that of genes encoding transcription factors such as RUNX1, RUNX2, or MEF2C) in HCT116 cells. HCT116 colon adenocarcinoma cell lines stably expressing cystatin D (HCT116-CST5 clone 9 and clone 20), mock-transfected (HCT116-Mock) and un-transfected (HCT116-Untransfected) were generated as described (Álvarez-Díaz et al., 2009, PUBMED:19662683) and genome-wide expression microarrays were obtained to achieve the gene expression profile induced by CST5.

References
Cystatin D Locates in the Nucleus at Sites of Active Transcription and Modulates Gene and Protein Expression.
Ferrer-Mayorga G, Alvarez-D�az S, Valle N, De Las Rivas J, Mendes M, Barderas R, Canals F, Tapia O, Casal JI, Lafarga M, Mu�oz A
PMID: 26364852
Array Platforms
A-GEOD-16987
[HuGene-1_0-st] Affymetrix Human Gene 1.0 ST Array [CDF: GATExplorer_Ensembl v57](4 items)
Sample Attributes
cell line
HCT116
cell type
colon adenocarcinoma
organism
Homo sapiens
transfection
CST5 clone 20, CST5 clone 9, mock-transfected, un-transfected
Experiment Info
Accession
E-GEOD-45904
GEO ID
GSE45904
Type
transcription profiling by array
Organism
Homo sapiens
Released
Nov. 4, 2015
Updated
Nov. 24, 2015
Submitter
Alberto Muñoz、 Javier De Las Rivas、 Silvia Alvarez-Díaz、 Marta Mendes、 Olga Tapia、 J I Casal、 Noelia Valle、 Carlos López-Otín、 Miguel Lafarga、 Rodrigo Barderas、 Javier De Las Rivas、 Gemma Ferrer-Mayorga
Analysis Services
Analysis Services

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