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E-GEOD-47734 GSE47734 transcription profiling by array Mus musculus

Interplay of host microbiota, genetic perturbations, and inflammation promote local development of intestinal neoplasms in mice

·发布 2014年2月12日 ·更新 2014年6月3日
6
样本数
6
实验数
1
芯片平台
实验描述

The preferential localization of some neoplasms, such as serrated polyps, in specific areas of the intestine suggests that non-genetic factors may be important for their development. To test this hypothesis, we took advantage of transgenic mice that expressed HB-EGF throughout the intestine, but develop serrated polyps only in the cecum. Here we show that a host-specific microbiome was associated with serrated polyps, and that alterations of the microbiota induced by antibiotic treatment or by embryo-transfer rederivation markedly inhibited the formation of serrated polyps in the cecum. Mechanistically, development of serrated polyps was associated with a local decrease in epithelial barrier-function, bacterial invasion, production of antimicrobials, and increased expression of several inflammatory factors such as IL-17, Cxcl2, Tnf-α, and IL-1. Increased number of neutrophils were found within the serrated polyps, and their depletion significantly reduced polyp growth. Together these results indicate that non-genetic factors contribute to the development of serrated polyps and suggest that the development of these intestinal neoplasms in the cecum is driven by the interplay between genetic changes in the host, an inflammatory response, and a host-specific microbiota. Paired design; Surrounding and SP samples were obtained from the same mouse (n=3; mouse 1, 2, 3)

芯片平台
A-MEXP-1174
Illumina MouseRef-8 v2.0 Expression BeadChip(6 例)
样本属性
organism
Mus musculus
organism part
Normal surrounding (distal) cecum, Serrated polyp
strain
HBUS
实验信息
登记号
E-GEOD-47734
GEO 编号
GSE47734
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2014年2月12日
更新日期
2014年6月3日
提交者
Jordi Ochando、 Zhengxiang He、 Glaucia C Furtado、 Thais H Geraldino、 Lili Chen、 Daigo Hashimoto、 Miriam Merad、 Gerold Bongers、 Kevin A Kelley、 Harm van Bakel、 Michelle E Pacer、 Sergio A Lira、 Jose C Clemente
分析服务
分析服务

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