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E-GEOD-49216 GSE49216 transcription profiling by array Mus musculus

Gene regulation by Pax6 in the lens placode - E10.25

·Released Sept. 23, 2013 ·Updated June 3, 2014
6
Samples
6
Assays
1
Array Platforms
2
References
Description

Wild type or Pax6 fx/fx; Le-Cre-positive surface ectoderm from E10.25 mouse embryos was laser micodissected from three embryos of each genotype. Total RNA was purified and reverse transcribed and amplified using a NuGEN kit. cDNA was biotinylated and hybridized to Illumina Mouse6 bead arrays. Three wild type and three knockout embryos were used. Each array used the cDNA obtained from the two prospective lens tissues from one embryo.

References
Histone posttranslational modifications and cell fate determination: lens induction requires the lysine acetyltransferases CBP and p300.
Wolf L, Harrison W, Huang J, Xie Q, Xiao N, Sun J, Kong L, Lachke SA, Kuracha MR, Govindarajan V, Brindle PK, Ashery-Padan R, Beebe DC, Overbeek PA, Cvekl A
PMID: 24038357
The mechanism of lens placode formation: a case of matrix-mediated morphogenesis.
Huang J, Rajagopal R, Liu Y, Dattilo LK, Shaham O, Ashery-Padan R, Beebe DC
PMID: 21540023
Array Platforms
A-MEXP-933
Illumina MouseWG-6 v1.1 Expression BeadChip(6 items)
Sample Attributes
age
E10.25
genotype
Pax6-/-, wild type
organism
Mus musculus
organism part
lens placode, surface ectoderm
strain/background
mixed (FVB; 129)
Experiment Info
Accession
E-GEOD-49216
GEO ID
GSE49216
Type
transcription profiling by array
Organism
Mus musculus
Released
Sept. 23, 2013
Updated
June 3, 2014
Submitter
David C Beebe、 David Cy Beebe、 Jie Huang
Analysis Services
Analysis Services

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