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E-GEOD-49793 GSE49793 transcription profiling by array Homo sapiens

Transcriptional consequences of manipulating the candidate schizophrenia susceptibility gene miR-137 in human neural progenitor cells

·Released Feb. 10, 2014 ·Updated May 13, 2014
12
Samples
12
Assays
1
Array Platforms
Description

In the largest published genome-wide association study (GWAS) of schizophrenia to date (PGC1), the most significant association (P = 1.6 X 10-11) was observed at an intronic variant (rs1625579) within the MIR137 host gene (MIR137HG). In this study we have performed genome-wide RNA profiling of a human foetal neural progenitor cell line following miR-137 manipulation, in order to identify gene expression changes through which genetic variation at the MIR137HG locus could confer susceptibility to schizophrenia. Total RNA extracted from human neural progenitor cells manipulated with either mir137 inhibitor or mimic. 4 replicates per group. Genome wide transcript levels were then measured using gene expression microarrays.

Array Platforms
A-GEOD-10558
Illumina HumanHT-12 V4.0 expression beadchip(12 items)
Sample Attributes
brain region of origin
Fetal cortical neuroepithelium
cell line
CTXOE03 cell line
cell type
Neural progenitor
organism
Homo sapiens
sex
male
Experiment Info
Accession
E-GEOD-49793
GEO ID
GSE49793
Type
transcription profiling by array
Organism
Homo sapiens
Released
Feb. 10, 2014
Updated
May 13, 2014
Submitter
Ricardo Sainz-Fuertes、 Richard Killick、 Matthew J Hill、 Jacek G Donocik、 Charles A Mein、 Nicholas J Bray、 Matthew James Hill、 Rosamond A Nuamah
Analysis Services
Analysis Services

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