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E-GEOD-50012 GSE50012 transcription profiling by array Homo sapiens

Comparison of cellular and transcriptional responses to 1,25-dihydroxyvitamin D3 and glucocorticoids in peripheral blood mononuclear cells

·发布 2013年8月21日 ·更新 2014年5月13日
72
样本数
72
实验数
1
芯片平台
实验描述

Glucocorticoids (GC) and 1,25-dihydroxyvitamin D3 (1,25(OH)2 D3) are steroid hormones with anti-inflammatory properties with enhanced effects when combined. We previously showed that transcriptional response to GCs was correlated with inter-individual and inter-ethnic cellular response. Here, we profiled cellular and transcriptional responses to 1,25(OH)2 D3 from the same donors. We studied cellular response to combined treatment with GCs and 1,25(OH)2 D3 in a subset of individuals least responsive to GCs. We found that combination treatment had significantly greater inhibition of proliferation than with either steroid hormone alone. Overlapping differentially expressed (DE) genes between the two hormones were enriched for adaptive and innate immune processes. Non-overlapping differentially expressed genes with 1,25(OH)2 D3 treatment were enriched for pathways involving the electron transport chain, while with GC treatment, non-overlapping genes were enriched for RNA-related processes. These results suggest that 1,25(OH)2 D3 enhances GC anti-inflammatory properties through a number of shared and non-shared transcriptionally-mediated pathways. Total RNA was obtained from aliquots of peripheral blood mononuclear cells treated with 1,25-dihydroxyvitamin D3 (1,25(OH)2 D3) for 8 and 24 hours. These data were analyzed together with previously published data from expression analysis of PBMC aliquots collected in parallel to these and treated with dexamethasone or vehicle (EtOH).

芯片平台
A-GEOD-10558
Illumina HumanHT-12 V4.0 expression beadchip(72 例)
样本属性
age years
20.38, 20.38082, 21.24, 21.2411, 21.56, 21.5616, 21.9863, 21.99, 22.54, 22.54247, 23.47945, 23.48, 23.59, 23.59452, 24.72, 24.72329, 26.13973, 26.14, 26.76712, 26.77, 32.37808, 32.38, 44.15, 44.15342
cell type
None, peripheral blood mononuclear cell
duration of treatment hours
24, 8
in vitro lymphocyte gc sensitivity lgs - %inhibition by dex
None, 86.97089, 88.55031, 89.43486, 90.09957, 91.14896, 92.86704, 93.71633, 94.17097, 95.22036, 95.88507, 96.76962, 98.34904
in vitro lymphocyte vitd sensitivity lgs - %inhibition by vitd
None, -48.98, 11.97, 18.89, 22.84, 27.58, 29.99, 3.43, 31.77, 39.98, 47.72, 59.62, 84.49
organism
Homo sapiens
population
African-American, European-American
sex
female, male
实验信息
登记号
E-GEOD-50012
GEO 编号
GSE50012
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
2013年8月21日
更新日期
2014年5月13日
提交者
Joseph C Maranville、 Joseph C Maranville、 Sonia S Kupfer、 Yong Huang、 Shaneen S Baxter、 Anna Di Rienzo
分析服务
分析服务

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