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E-GEOD-50168 GSE50168 transcription profiling by RT-PCR Mus musculus

Real-time quantitative PCR analysis of fatty acid metabolism genes of liver tissue from wild-type and PPARα (-/-) mice exposed to 2,4-dinitrotoluene (fatty acid)

·Released June 30, 2014 ·Updated July 14, 2014
24
Samples
24
Assays
1
Array Platforms
Description

2,4-dinitrotoluene (2,4-DNT), a nitroaromatic used in industrial and explosive manufacturing processes, is known to contaminate artillery ranges, demilitarization areas and munitions manufacturing facilities. Previous transcriptomic and lipidomic studies identified energy metabolism as a principle biochemical process affected by 2,4-DNT where up-stream effects on PPARα signaling were hypothesized as themolecular initiating event for these effects. Here, the validity of this hypothetical adverse outcome pathway (AOP) was assessed by testing the hypothesis that 2,4-DNT-induced perturbations in PPARα signaling and resultant downstream deficits in energy metabolism, especially from lipids, would result in organism-level impacts on exercise endurance. PPARα knock-out (-/-) and wild-type (WT) mice were exposed for 14 days to vehicle or 2,4-DNT at a dose (134 mg/kg/day) that did not exhibit overt systemic toxicity. Mice performed an exercise challenge (forced swim) 1 day after the last dose. 2,4-DNT decreased swim times in WT and PPARα (-/-) mice, but the effect was significantly less in PPARα (-/-) mice indicating the critical of PPARα in mediating 2,4-DNT-induced energy metabolism deficits. 2,4-DNT caused down-regulation of transcripts involved in fatty acid metabolism, gluconeogenesis, triacylglycerol catabolism, and the pentose phosphate pathway, and 2,4-DNT treated wild-type mice had decreased serum trigylcerides and increased serum glucose versus 2,4-DNT treated PPARα (-/-) mice. Our results support the hypothesis that 2,4-DNT perturbs PPARα signaling as a molecular initiating event therefore impacting energy metabolism, especially lipid metabolism, producing reduced exercise endurance in mice. RNA was isolated from liver tissue of vehicle or 2,4-DNT treated wild-type or PPARα (-/-) mice (n=6) and RT-PCR performed to analyze genes involved in fatty acid metabolism

Array Platforms
A-GEOD-17621
SABiosciences Mouse Fatty Acid Metabolism PCR Array (Cat. No. PAMM-007Z)(24 items)
Sample Attributes
genetic background
C57BL/6
genotype
PPARα (-/-), wild type
organism
Mus musculus
organism part
liver
sex
female
Experiment Info
Accession
E-GEOD-50168
GEO ID
GSE50168
Type
transcription profiling by RT-PCR
Organism
Mus musculus
Released
June 30, 2014
Updated
July 14, 2014
Submitter
Kurt Gust、 Mitchell Wilbanks、 Sahar Atwa、 Edward Perkins、 Sharon Meyer、 Imran Sunesara、 Mitchell Wilbanks
Analysis Services
Analysis Services

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