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E-GEOD-52416 GSE52416 transcription profiling by array Mus musculus

Effect of genetic Zfx deletion on Myc induced gene expression in bone marrrow myeloid progenitors

·Released Jan. 30, 2014 ·Updated July 29, 2015
12
Samples
12
Assays
1
Array Platforms
Description

Acute myeloid leukemia (AML) and acute T-lymphoblastic leukemia (T-ALL) maintain the undifferentiated phenotype and proliferative capacity of their respective cells of origin, hematopoietic stem/progenitor cells and immature thymocytes. The mechanisms that maintain these progenitor-like characteristics are poorly understood. We report that the transcription factor Zfx is required for the development and propagation of experimental AML caused by MLL-AF9 fusion, and of T-ALL caused by Notch1 activation. In both leukemia types, Zfx activated progenitor-associated gene expression programs and prevented differentiation. Key Zfx target genes included mitochondrial enzymes Ptpmt1 and Idh2, whose overexpression partially rescued the propagation of Zfx-deficient AML. These studies identify a common mechanism that controls the cell-of-origin characteristics of acute leukemias derived from disparate lineages and transformation mechanisms. Bone marrow progenitors (c-Kit +) from Zfx wt/y CreER mice and Zfx fl/y CreER mice were harvested after tamoxifen administration to induce Cre. The Zfx wt and Zfx ko progenitors were infected with Myc expressing and control retrovirus with GFP selectable marker and cultured for 48 hours in cytokine supplemented media. The GFP + myeloid progenitors were sorted and cultured for another 4 days prior to RNA extraction.

Array Platforms
A-AFFY-130
Affymetrix GeneChip Mouse Gene 1.0 ST Array [MoGene-1_0-st-v1](12 items)
Sample Attributes
genotype
Zfx fl/y CreER, Zfx wt/y CreER
organism
Mus musculus
Experiment Info
Accession
E-GEOD-52416
GEO ID
GSE52416
Type
transcription profiling by array
Organism
Mus musculus
Released
Jan. 30, 2014
Updated
July 29, 2015
Submitter
Boris V Reizis、 Stuart Weisberg、 Stuart P Weisberg
Analysis Services
Analysis Services

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