主页 实验库实验详情
E-GEOD-52759 GSE52759 transcription profiling by array Schizosaccharomyces pombe

Isp7 is a novel regulator of amino acid uptake in the TOR signaling pathway

·发布 2014年2月5日 ·更新 2014年6月3日
6
样本数
6
实验数
1
芯片平台
实验描述

We show that the sensitivity of tsc mutant cells to rapamycin is mediated by TORC1 and can be suppressed by overexpression of the 2-oxoglutarate-Fe(II) dependent oxygenase, Isp7. We show that Isp7 is a novel regulator of amino acids uptake that acts via regulation of gene expression, both upstream and downstream of TOR signaling. suppressed by overexpression of the putative 2-oxoglutarate-Fe(II) dependent oxygenase, Isp7. We show that Isp7 is a novel master regulator of amino acids uptake that acts via regulation of gene expression, both upstream and downstream of TOR signaling. TOR proteins reside in two distinct complexes, TOR complex 1 and 2 (TORC1 and TORC2) that are central for the regulation of cellular growth, proliferation and survival. TOR is also the target for the immunosuppressive and anti-cancer drug rapamycin. In Schizosaccharaomyces pombe, disruption of the TSC complex, mutations in which can lead to the Tuberous Sclerosis syndrome in humans, results in a rapamycin sensitive phenotype under poor nitrogen conditions. We show here that the sensitivity to rapamycin is mediated via inhibition of TORC1 and suppressed by overexpression of isp7+, a member of the family of 2-oxoglutarate-Fe(II) dependent oxygenases. The transcript level of isp7+ is negatively regulated by TORC1 but positively regulated by TORC2. Yet, we find extensive similarity between the transcriptome of cells disrupted for isp7+ and cells mutated in the catalytic subunit of TORC1. Moreover, Isp7 regulates amino acid permease expression similarly to TORC1 and in contrast to TORC2. Overexpression of isp7+ induces TORC1-dependent phosphorylation of ribosomal protein Rps6, while inhibiting TORC2-dependent phosphorylation and activation of the AGC-like kinase Gad8. Taken together, our findings suggest a central role for Isp7 in amino acid homeostasis and the presence of isp7+-dependent regulatory loops that affect both TORC1 and TORC2. 6 Samples (arrays) were performed. We generated pairwise comparison between DISP7 and WT, using Partek Genomics Suite. Genes with p≤5%[FDR] and a fold-change difference of ≥2\1.5 or <-2\-1.5 were selected.

芯片平台
A-AFFY-47
Affymetrix GeneChip Yeast Genome 2.0 Array [Yeast_2](6 例)
样本属性
genotype
isp7+ null, wild type
organism
Schizosaccharomyces pombe
实验信息
登记号
E-GEOD-52759
GEO 编号
GSE52759
实验类型
transcription profiling by array
物种
Schizosaccharomyces pombe
发布日期
2014年2月5日
更新日期
2014年6月3日
提交者
Adiel Cohen、 Martin Kupiec、 Metsada Pasmanik-Chor、 Dana Laor、 Ronit Weisman、 Metsada Pasmanik-Chor、 Varda Oron-Karni
分析服务
分析服务

联系地址

山东省济南市章丘区文博路2号

齐鲁师范学院 genelibs生信实验室

山东省济南市高新区舜华路750号

大学科技园北区F座4单元2楼

电话: 0531-88819269

微信公众号

关注微信订阅号,实时查看信息,关注医学生物学动态。


商务邮箱

E-mail: [email protected]