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E-GEOD-54108 GSE54108 transcription profiling by array Homo sapiens

A cDNA microarray analysis was performed on shRNA KDs of EZH2, SUZ12, BMI1, or CBX8 HepG2 cells

·Released Jan. 16, 2014 ·Updated Jan. 26, 2014
5
Samples
5
Assays
1
Array Platforms
Description

Polycomb group (PcG) proteins including EZH2, SUZ12 ,BMI1,CBX8 and so on, which specifically catalyze trimethylation of histone 3 lysine 27 (H3K27me3), and methylated H3K27 can be recognized by other specific binding proteins to compress chromatin structure, leading to the transcriptional repression of the target genes. To explore a potential functional implication of PcG components in HCC, we stably transfected HepG2 cells with either vectors or constructs expressing shRNA that specifically targets EZH2, SUZ12, BMI1, or CBX8. A cDNA microarray analysis was performed on shRNA KDs of EZH2, SUZ12, BMI1, or CBX8 HepG2 cells. To obtain a broader understanding of the molecular network of PcG in HCC, the whole genome microarray expression profiling was performed on shRNA KDs of EZH2, SUZ12, BMI1, or CBX8 HepG2 cells. Comparison of gene expression results from shRNA KDs of EZH2, SUZ12, BMI1 or CBX8 HepG2 cells.

Array Platforms
A-GEOD-10332
Agilent-026652 Whole Human Genome Microarray 4x44K v2 (Feature Number version)(5 items)
Sample Attributes
cell line
HepG2
organism
Homo sapiens
Experiment Info
Accession
E-GEOD-54108
GEO ID
GSE54108
Type
transcription profiling by array
Organism
Homo sapiens
Released
Jan. 16, 2014
Updated
Jan. 26, 2014
Submitter
Shu-bin Gao、 Bin Xu、 Shubin Gao
Analysis Services
Analysis Services

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