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E-GEOD-55855 GSE55855 transcription profiling by array Mus musculus

Effect of CSF1R inhibition in tumor macrophages on gene expression in metastatic epithelial cells

·发布 2014年3月13日 ·更新 2014年6月3日
6
样本数
6
实验数
1
芯片平台
实验描述

Metastasis is the primary cause of mortality in breast cancer patients. Tumor associated macrophages (TAMs) are active collaborators in mediating several steps of the tumor metastatic cascade, but the molecular details governing this collaboration remain ill-defined. Colony Stimulating Factor 1 (CSF1), a factor critical for macrophage differentiation and survival, functions to recruit TAMs to the primary tumor site, and anti-CSF1 therapies are in clinical trials.In this study, we tested the effect of inhibiting CSF1 signaling in macrophages on gene expression in metastatic tumor cells in mouse models of breast cancer metastasis. Tumor cells were sorted from lung metastases from control and CSF1R inhibitor treated mice. Several pro-tumor processes were significantly affected by CSF1R inhibitor treatment, including angiogenesis and tumor cell proliferation. In addition, a 29 gene signature derived from this data could retrospectively predict survival in a cohort of luminal B breast cancer patients. Collectievly, our results highlight the utility of employing CSF1R inhibitors for the treatment of metastatic breast cancer. GFP tagged MVT1 metastatic mammary tumor cells were injected intravenously into FVB/N mice. Mice were gavaged with the CSF1R inhibitor GW2580 or vehicle starting one week post injection. GFP tagged tumor cells were sorted from metastatic tumor bearing lungs 1 and 2 weeks post injection from 2 vehicle treated mice for each. These are denoted 1_week_WT and 2_week_WT respectively. GFP tagged tumor cells were simultaneously sorted from mice gavaged with GW2580. These samples are denoted 2_week_GW. RNA was extracted and gene expression profiling was performed using the Affymetrix Mouse Genome 430 2.0 Array platform.

芯片平台
A-AFFY-45
Affymetrix GeneChip Mouse Genome 430 2.0 [Mouse430_2](6 例)
样本属性
cell type
Tumor epithelial cell
organism
Mus musculus
organism part
lung
strain
FVB/N
实验信息
登记号
E-GEOD-55855
GEO 编号
GSE55855
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2014年3月13日
更新日期
2014年6月3日
提交者
Lianbo Yu、 Haritha Mathsyaraja、 Michael C Ostrowski、 Haritha Mathsyaraja
分析服务
分析服务

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