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E-GEOD-56306 GSE56306 transcription profiling by array Homo sapiens

The molecular changes that have occurred in breast cancer cells through the introduction of the MZF-1 fragment

·发布 2014年5月15日 ·更新 2014年5月25日
6
样本数
6
实验数
1
芯片平台
实验描述

We used microarray gene expression analyses to search for epithelial-mesenchymal transition (EMT)-related genes that exhibited the greatest differences in expression in the MZF-1 fragment vector-transfected cells relative to the empty vector-transfected cells. Of the 22,203 genes analyzed in both cell lines, 1209 genes had a two-fold increase and 1557 genes had a two-fold decrease in Hs578T-M(S3) cells (P<0.05), and 1272 genes increased and 1494 genes decreased by a similar amount in MDA-MB-231-M(V4) cells. Combined, 821 of the same genes from both cell lines were up-regulated, and 931 of the same genes from both cell lines were down-regulated. The biological functions of these affected genes were diverse and included 11 EMT-related genes (ITGA5, SERPINE1 GNGI1, SEAP1, TIMP1, FN1, TMEFF1, SNAI2, VIM, CALD1 and MSN) which were down-regulated, and 5 MET-related genes (CDH1, TSPAN13, OCLN, KRT19 and DSP) which were up-regulated. To understand functions of MZF-1/Elk-1 heterodimers, we transfected the binding site-derived peptide to the cells to interrupt heterodimer formation, their DNA binding activity, PKCα expression, cell migration and tumorigenicity were decreased, and the mesenchymal-epithelial transition (MET) was present.

芯片平台
A-AFFY-141
Affymetrix GeneChip Human Gene 1.0 ST Array [HuGene-1_0-st-v1](6 例)
样本属性
cell line
HS578T, MCF-7, MDA-MB-231, MDA-MB-468
cell type
breast adenocarcinoma cell line, breast carcinoma cell line
organism
Homo sapiens
sex
female
transfection
empty vector, MZF-1 fragment, none
实验信息
登记号
E-GEOD-56306
GEO 编号
GSE56306
实验类型
transcription profiling by array
物种
Homo sapiens
发布日期
2014年5月15日
更新日期
2014年5月25日
提交者
JerYuh Liu、 Jer-Yuh Liu
分析服务
分析服务

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