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E-GEOD-56548 GSE56548 transcription profiling by array Mus musculus

PAX6 Regulates Melanogenesis in the Retinal Pigmented Epithelium through Feed-Forward Regulatory Interactions with MITF

·Released April 8, 2014 ·Updated April 12, 2014
6
Samples
6
Assays
1
Array Platforms
Description

During organogenesis, PAX6 is required for establishment of various progenitor subtypes within the central nervous system, eye and pancreas. PAX6 expression is maintained in a variety of cell types within each organ, although its role in each lineage and how it acquires cell-specific activity remain elusive. Herein, we aimed to determine the roles and the hierarchical organization of the PAX6-dependent gene regulatory network during the differentiation of the retinal pigmented epithelium (RPE). Somatic mutagenesis of Pax6 in the differentiating RPE revealed that PAX6 functions in a feed-forward regulatory loop with MITF during onset of melanogenesis. PAX6 both controls the expression of an RPE isoform of Mitf and synergizes with MITF to activate expression of genes involved in pigment biogenesis. This study exemplifies how one kernel gene pivotal in organ formation accomplishes a lineage-specific role during terminal differentiation of a single lineage. The data contains 3 control and 3 Pax6 negative samples representing biological repeats. Each sample was prepared from RPE dissected from E15.5 transgenic animals, either Pax6loxP/loxP or Pax6loxP/loxP;DctCre.

Array Platforms
A-AFFY-130
Affymetrix GeneChip Mouse Gene 1.0 ST Array [MoGene-1_0-st-v1](6 items)
Sample Attributes
age
embryonic day 15.5
genotype
Pax6loxP/loxP, Pax6loxP/loxP;DctCre
organism
Mus musculus
organism part
retinal pigmented epithelium (RPE)
strain background
C57BL/6J
Experiment Info
Accession
E-GEOD-56548
GEO ID
GSE56548
Type
transcription profiling by array
Organism
Mus musculus
Released
April 8, 2014
Updated
April 12, 2014
Submitter
Shaul Raviv、 Ruth A Padan、 Ruth Ashery-Padan
Analysis Services
Analysis Services

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