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E-GEOD-60534 GSE60534 transcription profiling by array Arabidopsis thaliana

crr4_dyw1_col0-Comparative Arabidopsis Transcriptome -Sequencing

·Released Sept. 10, 2014 ·Updated Sept. 13, 2014
16
Samples
8
Assays
1
Array Platforms
Description

cat-seq - crr4_dyw1_col0 - A comparative assessment of the Arabidopsis sequencing approach High-throughput sequencing cDNA GAII or HiSeq2000 sequenceur (technology Solexa) and data on CATMA array hybridation (version 6). These different characteristics will be studied through the analysis of control samples but also samples from mutants in genes coding for cytosolic or nuclear PPR proteins - CRR4 and DYW1 are two PPR mutants. They have the same post-transcriptonnel molecular defect and their phenotype is very close. We will try to determine here if their transcriptome is similar or not. 4 dye-swap - genotype comparaison

Array Platforms
A-GEOD-15719
INRA-CNRS-UEVE Arabidopsis thaliana 73K CATMAv6-HD12(8 items)
Sample Attributes
genotype
control, CRR4 mutant, DYW1 mutant
harvest date
23-12-10, 24-12-10, 3-12-11, 4-12-11
organism
Arabidopsis thaliana
organism part
aerial portion of plant
Experiment Info
Accession
E-GEOD-60534
GEO ID
GSE60534
Type
transcription profiling by array
Organism
Arabidopsis thaliana
Released
Sept. 10, 2014
Updated
Sept. 13, 2014
Submitter
Claire Lurin、 Marie-Laure Martin-Magniette、 Soubigou-Taconnat Ludivine、 Sandrine Balzergue
Analysis Services
Analysis Services

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