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E-GEOD-62362 GSE62362 transcription profiling by array Mus musculus

Interstrain differences in the severity of liver injury induced by a choline- and folate-deficient diet in mice are associated with dysregulation of genes involved in lipid metabolism

·Released Oct. 16, 2014 ·Updated Oct. 19, 2014
24
Samples
24
Assays
1
Array Platforms
1
References
Description

Nonalcoholic fatty liver disease (NAFLD) is a major health problem and a leading cause of chronic liver disease in the United States and developed countries. In humans, genetic factors greatly influence individual susceptibility to NAFLD. The goals of this study were to compare the magnitude of interindividual differences in the severity of liver injury induced by methyl-donor deficiency among individual inbred strains of mice and to investigate the underlying mechanisms associated with the variability. Feeding mice a choline- and folate-deficient diet for 12 wk caused liver injury similar to NAFLD. The magnitude of liver injury varied among the strains, with the order of sensitivity being A/J ≈ C57BL/6J ≈ C3H/HeJ < 129S1/SvImJ ≈ CAST/EiJ < PWK/PhJ < WSB/EiJ. The interstrain variability in severity of NAFLD liver damage was associated with dysregulation of genes involved in lipid metabolism, primarily with a down-regulation of the peroxisome proliferator receptor α (PPARα)-regulated lipid catabolic pathway genes. Markers of oxidative stress and oxidative stress-induced DNA damage were also elevated in the livers but were not correlated with severity of liver damage. These findings suggest that the PPARα-regulated metabolism network is one of the key mechanisms determining interstrain susceptibility and severity of NAFLD in mice. Male A/J, C3H/HeJ and WSB/EiJ inbred mice were maintained on either control or choline- and folate-deficient (CFD) diets for 12 weeks. Gene expression profiles in the livers from control mice and mice fed a CFD-diet were investigated.

References
Interstrain differences in the severity of liver injury induced by a choline- and folate-deficient diet in mice are associated with dysregulation of genes involved in lipid metabolism.
Tryndyak V, de Conti A, Kobets T, Kutanzi K, Koturbash I, Han T, Fuscoe JC, Latendresse JR, Melnyk S, Shymonyak S, Collins L, Ross SA, Rusyn I, Beland FA, Pogribny IP
PMID: 22872676
Array Platforms
A-GEOD-13912
Agilent-028005 SurePrint G3 Mouse GE 8x60K Microarray (Feature Number version)(24 items)
Sample Attributes
age
20 weeks
organism
Mus musculus
organism part
liver
sex
male
strain
A/J, C3H/HeJ, WSB/EiJ
Experiment Info
Accession
E-GEOD-62362
GEO ID
GSE62362
Type
transcription profiling by array
Organism
Mus musculus
Released
Oct. 16, 2014
Updated
Oct. 19, 2014
Submitter
Frederick A Beland、 James C Fuscoe、 Volodymyr Tryndyak、 Aline de Conti、 Igor P Pogribny、 Volodymyr Tryndyak、 Tao Han、 Ivan Rusyn
Analysis Services
Analysis Services

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