主页 实验库实验详情
E-GEOD-63288 GSE63288, SRP049809 RNA-seq of coding RNA Homo sapiens

HNF4α is a therapeutic target that links AMPK to WNT signaling in early-stage gastric cancer

·发布 2014年11月15日 ·更新 2014年11月28日
44
样本数
44
实验数
实验描述

Background Worldwide, gastric cancer is the fourth most common malignancy and the most common cancer in East Asia. Development of targeted therapies for this disease has focused on a few known oncogenes but has had limited effects. Objective To determine oncogenic mechanisms and novel therapeutic targets specific for gastric cancer by identifying commonly dys-regulated genes from the tumors of both Asian-Pacific and Caucasian patients. Design We generated transcriptomic profiles of 22 Caucasian gastric cancer tumors and their matched non-cancerous samples, and performed an integrative analysis across different gastric cancer gene expression datasets. We examined the inhibition of commonly overexpressed oncogenes and their constituent signaling pathways by RNAi and/or pharmacologic inhibition. Results We found that HNF4α upregulation was a key signaling event in gastric tumors from both Caucasian and Asian patients, and HNF4α antagonism was antineoplastic. Perturbation experiments in GC tumor cell lines and xenograft models further demonstrated that HNF4α is downregulated by AMPKα signaling and the AMPK agonist metformin; blockade of HNF4α activity resulted in cyclin downregulation, cell cycle arrest, and tumor growth inhibition. HNF4α also regulated WNT signaling through its target gene WNT5A, a potential prognostic marker of diffuse type gastric tumors. Conclusions Our results indicate that HNF4α is a targetable oncoprotein in gastric cancer, is regulated by AMPK signaling through AMPKα, and resides upstream of WNT signaling. HNF4α may regulate “metabolic switch” characteristic of a general malignant phenotype and its target WNT5A has potential prognostic values. The AMPKα-HNF4α-WNT5A signaling cascade represents a potentially targetable pathway for drug development. Integrative analysis of Caucasian and Asian-Pacific gastric tumor expression datasets (including newly generated transcriptomic profiling of 22 tumors in this study) revealed a relatively small common sets of highly overexpressed genes.

样本属性
class
--, IA, IB, IIA, IIB, IIIA, IIIB, IIIC
location
Artrum, Body, distal, GE junction, proximal
organism
Homo sapiens
tissue type
gastric cancer tumor, normal gastric tissue
实验信息
登记号
E-GEOD-63288
GEO 编号
GSE63288, SRP049809
实验类型
RNA-seq of coding RNA
物种
Homo sapiens
发布日期
2014年11月15日
更新日期
2014年11月28日
提交者
Garth Powis、 Robert Lemos、 Yon H Kim、 Dongwan Hong、 Dongfeng Tan、 Hee S Park、 Han Liang、 Hae R Chang、 Han Liang、 Xiuping Liu、 Iksoo Huh、 Hui Yao、 Chang-Gong Liu、 Jyeong-Cherl Kook、 Hae R Jung、 Taesung Park、 Hye H Seo、 Seungyoon Nam、 Kyung-Tae Kim、 Young-Woo Kim、 Youme Gim
分析服务
分析服务

联系地址

山东省济南市章丘区文博路2号

齐鲁师范学院 genelibs生信实验室

山东省济南市高新区舜华路750号

大学科技园北区F座4单元2楼

电话: 0531-88819269

微信公众号

关注微信订阅号,实时查看信息,关注医学生物学动态。


商务邮箱

E-mail: [email protected]