主页 实验库实验详情
E-GEOD-64855 GSE64855 transcription profiling by array Mus musculus

Peturbation of PICALM Levels Alters Cellular Cholesterol Metabolism

·发布 2015年6月17日 ·更新 2015年6月20日
8
样本数
8
实验数
1
芯片平台
1
相关文献
实验描述

PICALM (Phosphatidyl Inositol Clathrin Assembly Lymphoid Myeloid protein) is a ubiquitously expressed protein that plays a role in clathrin-mediated endocytosis. PICALM also affects the internalization of SNAREs and modulates macroautophagy. Chromosomal translocations that result in the fusion of PICALM to heterologous proteins cause leukemias, and genome-wide association studies have linked Single Nucleotide Polymorphisms (SNPs) of PICALM to Alzheimer’s disease. To obtain insight into the biological role of PICALM, we performed gene expression studies of PICALM-deficient and PICALM-expressing cells. Pathway analysis demonstrated that PICALM expression influences the expression of genes that encode proteins involved in cholesterol biosynthesis and lipoprotein uptake. GC-MS studies indicated that loss of PICALM increases total cholesterol pool size. Isotopic labeling studies revealed that loss of PICALM alters cholesterol homeostasis via increased scavenging of cholesterol. Measurement of LDL receptor endocytosis further showed that PICALM deficient cells express higher LDLR levels resulting in higher lipoprotein internalization. These findings suggest that PICALM is required for cellular cholesterol homeostasis and point to a novel mechanism by which PICALM alterations may contribute to disease. Total RNA was isolated (Qiagen RNeasy® Micro kit, Valencia, CA) from four replicates of PICALM knockout cells transfected with control vector, and from four replicates of PICALM knockout cells transfected with PICALM.

参考文献
Modulation of PICALM Levels Perturbs Cellular Cholesterol Homeostasis.
Mercer JL, Argus JP, Crabtree DM, Keenan MM, Wilks MQ, Chi JT, Bensinger SJ, Lavau CP, Wechsler DS
PMID: 26075887
芯片平台
A-AFFY-36
Affymetrix GeneChip Mouse Genome 430A 2.0 [Mouse430A_2](8 例)
样本属性
background strain
B6(Cg)-TyrC-2J/J
cell line
PICALM6A, PICALM6B, PICALM6D, PICALM84
organism
Mus musculus
实验信息
登记号
E-GEOD-64855
GEO 编号
GSE64855
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2015年6月17日
更新日期
2015年6月20日
提交者
Steven J Bensinger、 Jen-Tsan Chi、 Daniel S Wechsler、 Jacob L Mercer、 Joseph P Argus、 Catherine P Lavau、 Jen-Tsan A Chi、 Donna Crabtree、 Melissa M Keenan
分析服务
分析服务

联系地址

山东省济南市章丘区文博路2号

齐鲁师范学院 genelibs生信实验室

山东省济南市高新区舜华路750号

大学科技园北区F座4单元2楼

电话: 0531-88819269

微信公众号

关注微信订阅号,实时查看信息,关注医学生物学动态。


商务邮箱

E-mail: [email protected]