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E-GEOD-66461 GSE66461 transcription profiling by array Mus musculus

The transcription factor IRF1 and guanylate-binding proteins target activation of the AIM2 inflammasome by Francisella infection

·发布 2015年3月4日 ·更新 2015年3月6日
8
样本数
8
实验数
1
芯片平台
实验描述

Inflammasomes are critical for mounting host defense against pathogens. The molecular mechanisms that control activation of the AIM2 inflammasome in response to different cytosolic pathogens remain unclear. Here we found that the transcription factor IRF1 was required for the activation of the AIM2 inflammasome during infection with the Francisella tularensis subspecies novicida (F. novicida), whereas engagement of the AIM2 inflammasome by mouse cytomegalovirus (MCMV) or transfected double-stranded DNA did not require IRF1. Infection of F. novicida detected by the DNA sensor cGAS and its adaptor STING induced type I interferon-dependent expression of IRF1, which drove the expression of guanylate-binding proteins (GBPs); this led to intracellular killing of bacteria and DNA release. Our results reveal a specific requirement for IRF1 and GBPs in the liberation of DNA for AIM2 sensing depending on the pathogen encountered by the cell. We used microarrays to explore the gene expression profiles differentially expressed in Francisella-infected bone marrow-derived macrophages (BMDMs) isolated from Irf1-/-, Ifnar1-/-, Aim2-/- and wild-type mice.

芯片平台
A-GEOD-16570
[MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version](8 例)
样本属性
cell type
bone marrow-derived macrophage
genotype
Aim2-/-, Ifnar1-/-, Irf1-/-, wild-type
organism
Mus musculus
strain/background
C57BL/6
实验信息
登记号
E-GEOD-66461
GEO 编号
GSE66461
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2015年3月4日
更新日期
2015年3月6日
提交者
Thirumala D Kanneganti、 Si M Man、 Geoffrey Neale、 Geoffrey Neale
分析服务
分析服务

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