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E-GEOD-66899 SRP056164, GSE66899 ChIP-seq Mus musculus

Batf3 maintains Irf8 autoactivation for commitment of a novel clonogenic progenitor of CD8+DCs

·发布 2015年6月8日 ·更新 2015年6月13日
14
样本数
14
实验数
实验描述

The transcription factors Batf3 and IRF8 are required for development of CD8α+ conventional dendritic cells (cDCs), but the basis for their actions was unclear. Here, we identify two novel Zbtb46+ progenitors that separately generate CD8α+ and CD4+ cDCs and arise directly from the common DC progenitor (CDP). Irf8 expression in the CDP depends on prior PU.1-dependent autoactivation, and specification of pre-CD8 DC progenitors requires IRF8 but not Batf3. However, upon pre-CD8 DC specification, Irf8 autoactivation becomes Batf3-dependent at a CD8α+ cDC-specific enhancer containing multiple AP1-IRF composite elements (AICEs) within the Irf8 superenhancer. CDPs from Batf3-/- mice that specify toward pre-CD8 DCs fail to complete CD8α+ cDC development due to decay of Irf8 autoactivation, and divert to the CD4+ cDC lineage. Examination of histone modifications (H3K27ac and H3K4me1) and 2 transcription factors (Batf3 and Irf8) and the p300 co-factor binding in 3 different dendritic cell subsets

样本属性
antibody vendor/catalog#
Ab 4729, Abcam, Ab 8895, Abcam, sc-585X, Santa Cruz Biotechnology, sc-6058x, Santa Cruz Biotechnology
cell type
CD172+DC, CD24+DC, pDC, whole cultured cells
chip antibody
anti-Batf3, anti-H3K27ac, anti-H3K4me1, anti-Irf8, anti-p300, none
organism
Mus musculus
实验信息
登记号
E-GEOD-66899
GEO 编号
SRP056164, GSE66899
实验类型
ChIP-seq
物种
Mus musculus
发布日期
2015年6月8日
更新日期
2015年6月13日
提交者
Kenneth M Murphy、 Gary E Grajales-Reyes、 Arifumi Iwata
分析服务
分析服务

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