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E-GEOD-69043 GSE69043, SRP058498 ChIP-seq Homo sapiens

Pioneer factor FOXA1 defines GATA2- and AR-mediated transcriptional program in prostate cancer [ChIP-Seq]

·发布 2016年1月11日 ·更新 2016年1月16日
28
样本数
28
实验数
1
相关文献
实验描述

AR is tightly regulated by many transcriptional cofactors, including key pioneer factor such as FOXA1 and GATA2. While FOXA1 was recently shown to be able to redistribute AR across the genome, how GATA2 regulates AR cistrome has not been carefully investigated. Here, we report that, unlike FOXA1, GATA2 is unable to reprogram AR, but instead it enhances AR program by inducing AR expression and augmenting AR co-occupancy, thereby acting as a pure AR coactivator, rather than a pioneer factor. On the other hand, AR co-occupancy enhances both GATA2 and FOXA1 binding on the chromatin, forming a positive feedback loop. Importantly, we found that FOXA1 is also capable of reprogramming GATA2 by recruiting GATA2 from GATA motif to FKHD-containing regions, being analogous to its pioneering effect on AR signaling. By contrast, GATA2 simply acts as a co-activator of FOXA1 with a lack of pioneering ability. ChIP_Seq examination of AR, FoxA1 and GATA2 binding sites in LNCaP and DU145 cells

参考文献
样本属性
antibody
AR (millipore, catalog# 06-680 lot# JBC1860890), FoxA1 (abcam, catalog# ab23738, lot# GR44102-1), GATA2 (santa cruz, catalog# sc-9008, lot# H1511)
cell line
DU145, LNCAP
cell type
prostate tumor
organism
Homo sapiens
实验信息
登记号
E-GEOD-69043
GEO 编号
GSE69043, SRP058498
实验类型
ChIP-seq
物种
Homo sapiens
发布日期
2016年1月11日
更新日期
2016年1月16日
提交者
Jindan Yu、 Jonathan Zhao、 Jindan Yu
分析服务
分析服务

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