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E-GEOD-69436 GSE69436 transcription profiling by array Mus musculus

Critical role for the DNA receptor AIM2 in stem-cell proliferation and cancer

·发布 2015年7月15日 ·更新 2015年9月7日
12
样本数
12
实验数
1
芯片平台
1
相关文献
实验描述

Colorectal cancer is a leading cause of cancer-related deaths. Mutations in the innate immune receptor AIM2 are frequently identified in patients with colorectal cancer, but how AIM2 modulates colonic tumorigenesis is unknown. Here, we found that Aim2-deficient mice were hypersusceptible to colonic tumor development. Production of inflammasome-associated cytokines and other inflammatory mediators were largely intact in Aim2-deficient mice, however, intestinal stem cells were prone to uncontrolled proliferation. Aberrant Wnt signaling expanded a population of tumor-initiating stem cells in the absence of AIM2. Susceptibility of Aim2-deficient mice to colorectal tumorigenesis was enhanced by a dysbiotic gut microbiota, which was reduced by reciprocal exchange of gut microbiota with wild-type healthy mice. These findings uncover a synergy between a specific host genetic factor and gut microbiota in determining the susceptibility to colorectal cancer. Therapeutic modulation of AIM2 expression and microbiota has the potential to prevent colorectal cancer. We used microarrays to compare the transcriptome Aim2 deficent mice to wild type mice in colon tumor and colitis samples. Here were 12 mice in total, 3 for each genotype and tissue combination.

参考文献
Critical Role for the DNA Sensor AIM2 in Stem Cell Proliferation and Cancer.
Man SM, Zhu Q, Zhu L, Liu Z, Karki R, Malik A, Sharma D, Li L, Malireddi RK, Gurung P, Neale G, Olsen SR, Carter RA, McGoldrick DJ, Wu G, Finkelstein D, Vogel P, Gilbertson RJ, Kanneganti TD
PMID: 26095253
芯片平台
A-GEOD-16570
[MoGene-2_0-st] Affymetrix Mouse Gene 2.0 ST Array [transcript (gene) version](12 例)
样本属性
genotype
Aim2 -/-, wild type
organism
Mus musculus
实验信息
登记号
E-GEOD-69436
GEO 编号
GSE69436
实验类型
transcription profiling by array
物种
Mus musculus
发布日期
2015年7月15日
更新日期
2015年9月7日
提交者
Qifan Zhu、 Scott R Olsen、 David Finkelstein、 Deepika Sharma、 Geoffrey Neale、 Robert A Carter、 Rajendra Karki、 Gang Wu、 Si M Man、 Richard J Gilbertson、 Daniel J McGoldrick、 Peter Vogel、 Ankit Malik、 Zhiping Liu、 Liyuan Li、 Thirumala-Devi Kanneganti、 Liqin Zhu、 David Finkelstein、 Prajwal Gurung、 R K Subbarao Malireddi
分析服务
分析服务

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