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E-GEOD-71934 GSE71934 transcription profiling by array Ambystoma mexicanum

Dynamic membrane depolarization is an early regulator of ependymoglial cell response to spinal cord injury in axolotl

·发布 2016年7月5日 ·更新 2016年12月28日
15
样本数
15
实验数
1
芯片平台
实验描述

Salamanders, such as the Mexican axolotl, are some of the few vertebrates fortunate in their ability to regenerate diverse structures after injury. Unlike mammals they are able to regenerate a fully functional spinal cord after injury. However, the early signals required to initiate a pro-regenerative response after spinal cord injury is not well understood. To address this question we developed a spinal cord injury model in axolotls and used in vivo imaging of ion sensitive dyes and determined that spinal cord injury induces a rapid and dynamic change in the resting membrane potential of ependymoglial cells. Prolonged depolarization of ependymoglial cells after injury inhibits glial cell proliferation and subsequent axon regeneration. Using transcriptional profiling we identified c-Fos as a key voltage sensitive early response gene that is expressed specifically in the ependymoglial cells after injury. This data establishes that dynamic changes in the membrane potential after injury are essential for regulating the specific spatiotemporal expression of c-Fos that is critical for promoting faithful spinal cord regeneration in axolotl. All axolotls used in these experiments were bred in the axolotl facility at the University of Minnesota under the IACUC protocol #1201A08381. Axolotls of 2–3 cm were used for all in vivo experiments, and animals were kept in separate containers and fed daily with artemia; water was changed daily. Animals were anesthetized in 0.01% p-amino benzocaine (Sigma) before microinjection was performed. Experimental Design: Ivermectin injection Ivermectin or vehicle only (water) was pressure injected into the central canal of the spinal cord, and this was visualized by the addition of Fast Green into the solution. Directly after injection, a portion of the spinal cord was surgically removed and the animals were placed back into water in individual containers. One day post injury (1dpi) animals were anesthetized again and the area of the injury was removed. Tissue from 10 animals were pooled for each microarray replicate.

芯片平台
A-GEOD-15153
Affymetrix Ambystoma mexicanum AMBY_002 20k array [CDF: AMBY_002a520748F](15 例)
样本属性
age
1month old
organism
Ambystoma mexicanum
organism part
spinal cord
stress
spinal cord injury, uninjured
实验信息
登记号
E-GEOD-71934
GEO 编号
GSE71934
实验类型
transcription profiling by array
物种
Ambystoma mexicanum
发布日期
2016年7月5日
更新日期
2016年12月28日
提交者
Tiago Santos-Ferreria、 Sarah Rudasill、 Karen Echeverri、 Keith Sabin、 Jaclyn Essig
分析服务
分析服务

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