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E-GEOD-73641 GSE73641, SRP064401 ChIP-seq Mus musculus

A network including TGFβ/Smad4, Gata2 and p57 regulates proliferation of mouse hematopoietic stem/progenitor cells [ChIP-seq]

·发布 2016年9月1日 ·更新 2016年9月12日
1
样本数
1
实验数
实验描述

Transforming growth factor-β (TGFβ) is a potent inhibitor of hematopoietic stem cell (HSC) proliferation. However, the precise mechanism for this effect is unknown. Here, we have identified the transcription factor Gata2, previously described as an important regulator of HSC function, as an early and direct target gene for TGFβ-induced Smad signaling in hematopoietic stem and progenitor cells (HSPCs). Interestingly, TGFβ-induced Gata2 upregulation is critical for subsequent transcriptional activation of the TGFβ signaling effector molecule p57 and resulting growth arrest of HSPCs. Importantly, both Gata2 and p57 are abundantly expressed in freshly isolated highly purified HSCs, demonstrating the relevance of this circuit in HSC regulation within the HSC niche. Our results connect key molecules involved in HSC self-renewal and reveal a functionally relevant network regulating proliferation of primitive hematopoietic cells. To identify TGFβ targets downstream of Gata2, we carried out a ChIP-Seq experiment on TGFβ-induced Lhx2 cells. Interestingly, there was a large overlap between the GATA2-bound genes and genes differentially expressed after 2h TGFβ induction. One sample of 1x10^8 cells (treated with 10 ng/ml TGFβ for 2h) was sequenced.

样本属性
cell line
Lhx2
chip antibody
Gata2 (Santa Cruz, cat# sc9008x, lot# I0109)
organism
Mus musculus
实验信息
登记号
E-GEOD-73641
GEO 编号
GSE73641, SRP064401
实验类型
ChIP-seq
物种
Mus musculus
发布日期
2016年9月1日
更新日期
2016年9月12日
提交者
Stefan Karlsson、 Shamit Soneji、 Shamit Soneji、 Alex J Tipping、 Matilda Billing、 Goran Karlsson、 Tariq Enver、 John Brown、 Emma Rorby、 Marjo Salminen
分析服务
分析服务

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